8XGR
Etb-egt complex bound to endothelin-1
PDB DOI: 10.2210/pdb8xgr/pdb
Classification: PEPTIDE BINDING PROTEIN/IMMUNE SYSTEM Organism(s): Parengyodontium Album , Salmonella Enterica , Klebsiella Phage Phiko2 , Vanderwaltozyma Polyspora (Strain Atcc 22028 / Dsm 70294) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2023-12-15 Deposition Author(s): Akasaka, H. , Iwama, A. , Nureki, O. , Oshima, H.S. , Sano, F.K. , Shihoya, W.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.2 Å
Etb-egt complex bound to endothelin-1
Akasaka, H. , Iwama, A. , Nureki, O. , Oshima, H.S. , Sano, F.K. , Shihoya, W.
Primary Citation of Related Structures: 8XGR
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2,eGt-alpha | G | 434 | Parengyodontium Album , Salmonella Enterica , Klebsiella Phage Phiko2 , Vanderwaltozyma Polyspora (Strain Atcc 22028 / Dsm 70294) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MASNNTASIAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASENPFREKKFFCAILGSAGSAGSAMGCTLSAEDKAAVERSKMIDRNLREDGEKAARTVKLLLLGAGESGKSTIVKQMKIIHQDGYSLEECLEFIAIIYGNTLQSILAIVRAMTTLNIQYGDSARQDDARKLMHMADTIEEGTMPKEMSDIIQRLWKDSGIQACFDRASEYQLNDSAGYYLSDLERLVTPGYVPTEQDVLRSRVKTTGIIETQFSFKDLNFRMFDVGGQRDERRKWIHCFEGVTAIIFCVALSDYDMVLVEDNQTNRMQESMNLFKSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTDYYPEYAGSNTYEEAGNYIKVQFLELNMASDVKEIYSHMTCATDTQNVKFVFDAVTDIIIKENLKDCGLF |
| Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 | B | 374 | Parengyodontium Album , Salmonella Enterica , Klebsiella Phage Phiko2 , Vanderwaltozyma Polyspora (Strain Atcc 22028 / Dsm 70294) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | GSQLQSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWNGASGGGSGGNSGSSGGSSGVSGWRLFKKIS |
| Camelid antibody VHH fragment | N | 161 | Parengyodontium Album , Salmonella Enterica , Klebsiella Phage Phiko2 , Vanderwaltozyma Polyspora (Strain Atcc 22028 / Dsm 70294) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MKYLLPTAAAGLLLLAAQPAMAMQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLQWVSDISQSGASISYTGSVKGRFTISRDDAKNTLYLQMNSLKPADTAVYYCARCPAPFTRDCFDVTSTAYAYRGQGTQVTVSSHHHHHHEPEA |
| Endothelin receptor type B | R | 609 | Parengyodontium Album , Salmonella Enterica , Klebsiella Phage Phiko2 , Vanderwaltozyma Polyspora (Strain Atcc 22028 / Dsm 70294) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | EERGFPPDRATPLLQTAEIMTPPTKTLWPKGDYKDDDDKLAPAEVPKGDRTAGSPPRTISPPPCQGPIEIKETFKYINTVVSCLVFVLGIIGNSTLLRIIYKNKCMRNGPNILIASLALGDLLHIVIDIPINVYKLLAEDWPFGAEMCKLVPFIQKASVGITVLSLCALSIDRYRAVASWSRIKGIGVPKWTAVEIVLIWVVSVVLAVPEAIGFDIITMDYKGSYLRICLLHPVQKTAFMQFYKTAKDWWLFSFYFCLPLAITAFFYTLMTCEMLRKKSGMQIALNDHLKQRREVAKTVFCLVLVFALCWLPLHLSRILKLTLYNQNDPNRCELLSFLLVLDYIGINMASLNSCINPIALYLVSKRFKNCFKSCLCCWCQSFEEKQSLEEKQSCLKFKANDHGYDNFRSSNKYSSSGSGGGGSGGSSSGGVFTLEDFVGDWEQTAAYNLDQVLEQGGVSSLLQNLAVSVTPIQRIVRSGENALKIDIHVIIPYEGLSADQMAQIEEVFKVVYPVDDHHFKVILPYGTLVIDGVTPNMLNYFGRPYEGIAVFDGKKITVTGTLWNGNKIIDERLITPDGSMLFRVTINSGGSGGGGSGGSSSGGLEVLFQ |
| Endothelin-1 | L | 21 | Parengyodontium Album , Salmonella Enterica , Klebsiella Phage Phiko2 , Vanderwaltozyma Polyspora (Strain Atcc 22028 / Dsm 70294) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | CSCSSLMDKECVYFCHLDIIW |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2023-12-15 Deposition Author(s): Akasaka, H. , Iwama, A. , Nureki, O. , Oshima, H.S. , Sano, F.K. , Shihoya, W.