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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8XAV

Cryo-em structure of an anti-phage defense complex

PDB DOI: 10.2210/pdb8xav/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Escherichia Coli

Deposited: 2023-12-05
Deposition Author(s): Deng, Z. , Wang, Y.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.87 Å

Literature

Cryo-em structure of an anti-phage defense complex

Deng, Z. , Wang, Y.

Primary Citation of Related Structures: 8XAV


Proteins
Molecule Chains Sequence Length Organism Sequence
ATP-binding protein A 571 Escherichia Coli MSRNNDINAEVVSVSPNKLKISVDDLEEFKIAEEKLGVGSYLRVSDNQDVALLAIIDNFSIEVKESQKQKYMIEASPIGLVKNGKFYRGGDSLALPPKKVEPAKLDEIISIYSDSIDINDRFTFSSLSLNTKVSVPVNGNRFFNKHIAIVGSTGSGKSHTVAKILQKAVDEKQEGYKGLNNSHIIIFDIHSEYENAFPNSNVLNVDTLTLPYWLLNGDELEELFLDTEANDHNQRNVFRQAITLNKKIHFQGDPATKEIISFHSPYYFDINEVINYINNRNNERKNKDNEHIWSDEEGNFKFDNENAHRLFKENVTPDGSSAGALNGKLLNFVDRLQSKIFDKRLDFILGEGSKSVTFKETLETLISYGKDKSNITILDVSGVPFEVLSICVSLISRLIFEFGYHSKKIKRKSNENQDIPILIVYEEAHKYAPKSDLSKYRTSKEAIERIAKEGRKYGVTLLLASQRPSEISETIFSQCNTFISMRLTNPDDQNYVKRLLPDTVGDITNLLPSLKEGEALIMGDSISIPSIVKIEKCTIPPSSIDIKYLDEWRKEWVDSEFDKIIEQWSKS
ATP-binding protein B 571 Escherichia Coli MSRNNDINAEVVSVSPNKLKISVDDLEEFKIAEEKLGVGSYLRVSDNQDVALLAIIDNFSIEVKESQKQKYMIEASPIGLVKNGKFYRGGDSLALPPKKVEPAKLDEIISIYSDSIDINDRFTFSSLSLNTKVSVPVNGNRFFNKHIAIVGSTGSGKSHTVAKILQKAVDEKQEGYKGLNNSHIIIFDIHSEYENAFPNSNVLNVDTLTLPYWLLNGDELEELFLDTEANDHNQRNVFRQAITLNKKIHFQGDPATKEIISFHSPYYFDINEVINYINNRNNERKNKDNEHIWSDEEGNFKFDNENAHRLFKENVTPDGSSAGALNGKLLNFVDRLQSKIFDKRLDFILGEGSKSVTFKETLETLISYGKDKSNITILDVSGVPFEVLSICVSLISRLIFEFGYHSKKIKRKSNENQDIPILIVYEEAHKYAPKSDLSKYRTSKEAIERIAKEGRKYGVTLLLASQRPSEISETIFSQCNTFISMRLTNPDDQNYVKRLLPDTVGDITNLLPSLKEGEALIMGDSISIPSIVKIEKCTIPPSSIDIKYLDEWRKEWVDSEFDKIIEQWSKS
ATP-binding protein C 571 Escherichia Coli MSRNNDINAEVVSVSPNKLKISVDDLEEFKIAEEKLGVGSYLRVSDNQDVALLAIIDNFSIEVKESQKQKYMIEASPIGLVKNGKFYRGGDSLALPPKKVEPAKLDEIISIYSDSIDINDRFTFSSLSLNTKVSVPVNGNRFFNKHIAIVGSTGSGKSHTVAKILQKAVDEKQEGYKGLNNSHIIIFDIHSEYENAFPNSNVLNVDTLTLPYWLLNGDELEELFLDTEANDHNQRNVFRQAITLNKKIHFQGDPATKEIISFHSPYYFDINEVINYINNRNNERKNKDNEHIWSDEEGNFKFDNENAHRLFKENVTPDGSSAGALNGKLLNFVDRLQSKIFDKRLDFILGEGSKSVTFKETLETLISYGKDKSNITILDVSGVPFEVLSICVSLISRLIFEFGYHSKKIKRKSNENQDIPILIVYEEAHKYAPKSDLSKYRTSKEAIERIAKEGRKYGVTLLLASQRPSEISETIFSQCNTFISMRLTNPDDQNYVKRLLPDTVGDITNLLPSLKEGEALIMGDSISIPSIVKIEKCTIPPSSIDIKYLDEWRKEWVDSEFDKIIEQWSKS
ATP-binding protein D 571 Escherichia Coli MSRNNDINAEVVSVSPNKLKISVDDLEEFKIAEEKLGVGSYLRVSDNQDVALLAIIDNFSIEVKESQKQKYMIEASPIGLVKNGKFYRGGDSLALPPKKVEPAKLDEIISIYSDSIDINDRFTFSSLSLNTKVSVPVNGNRFFNKHIAIVGSTGSGKSHTVAKILQKAVDEKQEGYKGLNNSHIIIFDIHSEYENAFPNSNVLNVDTLTLPYWLLNGDELEELFLDTEANDHNQRNVFRQAITLNKKIHFQGDPATKEIISFHSPYYFDINEVINYINNRNNERKNKDNEHIWSDEEGNFKFDNENAHRLFKENVTPDGSSAGALNGKLLNFVDRLQSKIFDKRLDFILGEGSKSVTFKETLETLISYGKDKSNITILDVSGVPFEVLSICVSLISRLIFEFGYHSKKIKRKSNENQDIPILIVYEEAHKYAPKSDLSKYRTSKEAIERIAKEGRKYGVTLLLASQRPSEISETIFSQCNTFISMRLTNPDDQNYVKRLLPDTVGDITNLLPSLKEGEALIMGDSISIPSIVKIEKCTIPPSSIDIKYLDEWRKEWVDSEFDKIIEQWSKS
ATP-binding protein E 571 Escherichia Coli MSRNNDINAEVVSVSPNKLKISVDDLEEFKIAEEKLGVGSYLRVSDNQDVALLAIIDNFSIEVKESQKQKYMIEASPIGLVKNGKFYRGGDSLALPPKKVEPAKLDEIISIYSDSIDINDRFTFSSLSLNTKVSVPVNGNRFFNKHIAIVGSTGSGKSHTVAKILQKAVDEKQEGYKGLNNSHIIIFDIHSEYENAFPNSNVLNVDTLTLPYWLLNGDELEELFLDTEANDHNQRNVFRQAITLNKKIHFQGDPATKEIISFHSPYYFDINEVINYINNRNNERKNKDNEHIWSDEEGNFKFDNENAHRLFKENVTPDGSSAGALNGKLLNFVDRLQSKIFDKRLDFILGEGSKSVTFKETLETLISYGKDKSNITILDVSGVPFEVLSICVSLISRLIFEFGYHSKKIKRKSNENQDIPILIVYEEAHKYAPKSDLSKYRTSKEAIERIAKEGRKYGVTLLLASQRPSEISETIFSQCNTFISMRLTNPDDQNYVKRLLPDTVGDITNLLPSLKEGEALIMGDSISIPSIVKIEKCTIPPSSIDIKYLDEWRKEWVDSEFDKIIEQWSKS
ATP-binding protein F 571 Escherichia Coli MSRNNDINAEVVSVSPNKLKISVDDLEEFKIAEEKLGVGSYLRVSDNQDVALLAIIDNFSIEVKESQKQKYMIEASPIGLVKNGKFYRGGDSLALPPKKVEPAKLDEIISIYSDSIDINDRFTFSSLSLNTKVSVPVNGNRFFNKHIAIVGSTGSGKSHTVAKILQKAVDEKQEGYKGLNNSHIIIFDIHSEYENAFPNSNVLNVDTLTLPYWLLNGDELEELFLDTEANDHNQRNVFRQAITLNKKIHFQGDPATKEIISFHSPYYFDINEVINYINNRNNERKNKDNEHIWSDEEGNFKFDNENAHRLFKENVTPDGSSAGALNGKLLNFVDRLQSKIFDKRLDFILGEGSKSVTFKETLETLISYGKDKSNITILDVSGVPFEVLSICVSLISRLIFEFGYHSKKIKRKSNENQDIPILIVYEEAHKYAPKSDLSKYRTSKEAIERIAKEGRKYGVTLLLASQRPSEISETIFSQCNTFISMRLTNPDDQNYVKRLLPDTVGDITNLLPSLKEGEALIMGDSISIPSIVKIEKCTIPPSSIDIKYLDEWRKEWVDSEFDKIIEQWSKS
DUF4297 G 394 Escherichia Coli MDRSAVDTIRGYCYQVDKTIIEIFSLPQMDDSIDIECIEDVDVYNDGHLTAIQCKYYESTDYNHSVISKPIRLMLSHFKDNKEKGANYYLYGHYKSGQEKLTLPLKVDFFKSNFLTYTEKKIKHEYHIENGLTEEDLQAFLDRLVININAKSFDDQKKETIQIIKNHFQCEDYEAEHYLYSNAFRKTYDISCNKKDRRIKKSDFVESINKSKVLFNIWFYQYEGRKEYLRKLKESFIRRSVNTSPYARFFILEFQDKTDIKTVKDCIYKIQSNWSNLSKRTDRPYSPFLLFHGTSDANLYELKNQLFNEDLIFTDGYPFKGSVFTPKMLIEGFSNKEIHFQFINDIDDFNETLNSINIRKEVYQFYTENCLDIPSQLPQVNIQVKDFADIKEIV
DUF4297 H 394 Escherichia Coli MDRSAVDTIRGYCYQVDKTIIEIFSLPQMDDSIDIECIEDVDVYNDGHLTAIQCKYYESTDYNHSVISKPIRLMLSHFKDNKEKGANYYLYGHYKSGQEKLTLPLKVDFFKSNFLTYTEKKIKHEYHIENGLTEEDLQAFLDRLVININAKSFDDQKKETIQIIKNHFQCEDYEAEHYLYSNAFRKTYDISCNKKDRRIKKSDFVESINKSKVLFNIWFYQYEGRKEYLRKLKESFIRRSVNTSPYARFFILEFQDKTDIKTVKDCIYKIQSNWSNLSKRTDRPYSPFLLFHGTSDANLYELKNQLFNEDLIFTDGYPFKGSVFTPKMLIEGFSNKEIHFQFINDIDDFNETLNSINIRKEVYQFYTENCLDIPSQLPQVNIQVKDFADIKEIV
DUF4297 I 394 Escherichia Coli MDRSAVDTIRGYCYQVDKTIIEIFSLPQMDDSIDIECIEDVDVYNDGHLTAIQCKYYESTDYNHSVISKPIRLMLSHFKDNKEKGANYYLYGHYKSGQEKLTLPLKVDFFKSNFLTYTEKKIKHEYHIENGLTEEDLQAFLDRLVININAKSFDDQKKETIQIIKNHFQCEDYEAEHYLYSNAFRKTYDISCNKKDRRIKKSDFVESINKSKVLFNIWFYQYEGRKEYLRKLKESFIRRSVNTSPYARFFILEFQDKTDIKTVKDCIYKIQSNWSNLSKRTDRPYSPFLLFHGTSDANLYELKNQLFNEDLIFTDGYPFKGSVFTPKMLIEGFSNKEIHFQFINDIDDFNETLNSINIRKEVYQFYTENCLDIPSQLPQVNIQVKDFADIKEIV
DUF4297 J 394 Escherichia Coli MDRSAVDTIRGYCYQVDKTIIEIFSLPQMDDSIDIECIEDVDVYNDGHLTAIQCKYYESTDYNHSVISKPIRLMLSHFKDNKEKGANYYLYGHYKSGQEKLTLPLKVDFFKSNFLTYTEKKIKHEYHIENGLTEEDLQAFLDRLVININAKSFDDQKKETIQIIKNHFQCEDYEAEHYLYSNAFRKTYDISCNKKDRRIKKSDFVESINKSKVLFNIWFYQYEGRKEYLRKLKESFIRRSVNTSPYARFFILEFQDKTDIKTVKDCIYKIQSNWSNLSKRTDRPYSPFLLFHGTSDANLYELKNQLFNEDLIFTDGYPFKGSVFTPKMLIEGFSNKEIHFQFINDIDDFNETLNSINIRKEVYQFYTENCLDIPSQLPQVNIQVKDFADIKEIV
DUF4297 K 394 Escherichia Coli MDRSAVDTIRGYCYQVDKTIIEIFSLPQMDDSIDIECIEDVDVYNDGHLTAIQCKYYESTDYNHSVISKPIRLMLSHFKDNKEKGANYYLYGHYKSGQEKLTLPLKVDFFKSNFLTYTEKKIKHEYHIENGLTEEDLQAFLDRLVININAKSFDDQKKETIQIIKNHFQCEDYEAEHYLYSNAFRKTYDISCNKKDRRIKKSDFVESINKSKVLFNIWFYQYEGRKEYLRKLKESFIRRSVNTSPYARFFILEFQDKTDIKTVKDCIYKIQSNWSNLSKRTDRPYSPFLLFHGTSDANLYELKNQLFNEDLIFTDGYPFKGSVFTPKMLIEGFSNKEIHFQFINDIDDFNETLNSINIRKEVYQFYTENCLDIPSQLPQVNIQVKDFADIKEIV
DUF4297 L 394 Escherichia Coli MDRSAVDTIRGYCYQVDKTIIEIFSLPQMDDSIDIECIEDVDVYNDGHLTAIQCKYYESTDYNHSVISKPIRLMLSHFKDNKEKGANYYLYGHYKSGQEKLTLPLKVDFFKSNFLTYTEKKIKHEYHIENGLTEEDLQAFLDRLVININAKSFDDQKKETIQIIKNHFQCEDYEAEHYLYSNAFRKTYDISCNKKDRRIKKSDFVESINKSKVLFNIWFYQYEGRKEYLRKLKESFIRRSVNTSPYARFFILEFQDKTDIKTVKDCIYKIQSNWSNLSKRTDRPYSPFLLFHGTSDANLYELKNQLFNEDLIFTDGYPFKGSVFTPKMLIEGFSNKEIHFQFINDIDDFNETLNSINIRKEVYQFYTENCLDIPSQLPQVNIQVKDFADIKEIV
DUF4297 M 394 Escherichia Coli MDRSAVDTIRGYCYQVDKTIIEIFSLPQMDDSIDIECIEDVDVYNDGHLTAIQCKYYESTDYNHSVISKPIRLMLSHFKDNKEKGANYYLYGHYKSGQEKLTLPLKVDFFKSNFLTYTEKKIKHEYHIENGLTEEDLQAFLDRLVININAKSFDDQKKETIQIIKNHFQCEDYEAEHYLYSNAFRKTYDISCNKKDRRIKKSDFVESINKSKVLFNIWFYQYEGRKEYLRKLKESFIRRSVNTSPYARFFILEFQDKTDIKTVKDCIYKIQSNWSNLSKRTDRPYSPFLLFHGTSDANLYELKNQLFNEDLIFTDGYPFKGSVFTPKMLIEGFSNKEIHFQFINDIDDFNETLNSINIRKEVYQFYTENCLDIPSQLPQVNIQVKDFADIKEIV
DUF4297 N 394 Escherichia Coli MDRSAVDTIRGYCYQVDKTIIEIFSLPQMDDSIDIECIEDVDVYNDGHLTAIQCKYYESTDYNHSVISKPIRLMLSHFKDNKEKGANYYLYGHYKSGQEKLTLPLKVDFFKSNFLTYTEKKIKHEYHIENGLTEEDLQAFLDRLVININAKSFDDQKKETIQIIKNHFQCEDYEAEHYLYSNAFRKTYDISCNKKDRRIKKSDFVESINKSKVLFNIWFYQYEGRKEYLRKLKESFIRRSVNTSPYARFFILEFQDKTDIKTVKDCIYKIQSNWSNLSKRTDRPYSPFLLFHGTSDANLYELKNQLFNEDLIFTDGYPFKGSVFTPKMLIEGFSNKEIHFQFINDIDDFNETLNSINIRKEVYQFYTENCLDIPSQLPQVNIQVKDFADIKEIV
DUF4297 O 394 Escherichia Coli MDRSAVDTIRGYCYQVDKTIIEIFSLPQMDDSIDIECIEDVDVYNDGHLTAIQCKYYESTDYNHSVISKPIRLMLSHFKDNKEKGANYYLYGHYKSGQEKLTLPLKVDFFKSNFLTYTEKKIKHEYHIENGLTEEDLQAFLDRLVININAKSFDDQKKETIQIIKNHFQCEDYEAEHYLYSNAFRKTYDISCNKKDRRIKKSDFVESINKSKVLFNIWFYQYEGRKEYLRKLKESFIRRSVNTSPYARFFILEFQDKTDIKTVKDCIYKIQSNWSNLSKRTDRPYSPFLLFHGTSDANLYELKNQLFNEDLIFTDGYPFKGSVFTPKMLIEGFSNKEIHFQFINDIDDFNETLNSINIRKEVYQFYTENCLDIPSQLPQVNIQVKDFADIKEIV
DUF4297 P 394 Escherichia Coli MDRSAVDTIRGYCYQVDKTIIEIFSLPQMDDSIDIECIEDVDVYNDGHLTAIQCKYYESTDYNHSVISKPIRLMLSHFKDNKEKGANYYLYGHYKSGQEKLTLPLKVDFFKSNFLTYTEKKIKHEYHIENGLTEEDLQAFLDRLVININAKSFDDQKKETIQIIKNHFQCEDYEAEHYLYSNAFRKTYDISCNKKDRRIKKSDFVESINKSKVLFNIWFYQYEGRKEYLRKLKESFIRRSVNTSPYARFFILEFQDKTDIKTVKDCIYKIQSNWSNLSKRTDRPYSPFLLFHGTSDANLYELKNQLFNEDLIFTDGYPFKGSVFTPKMLIEGFSNKEIHFQFINDIDDFNETLNSINIRKEVYQFYTENCLDIPSQLPQVNIQVKDFADIKEIV
DUF4297 Q 394 Escherichia Coli MDRSAVDTIRGYCYQVDKTIIEIFSLPQMDDSIDIECIEDVDVYNDGHLTAIQCKYYESTDYNHSVISKPIRLMLSHFKDNKEKGANYYLYGHYKSGQEKLTLPLKVDFFKSNFLTYTEKKIKHEYHIENGLTEEDLQAFLDRLVININAKSFDDQKKETIQIIKNHFQCEDYEAEHYLYSNAFRKTYDISCNKKDRRIKKSDFVESINKSKVLFNIWFYQYEGRKEYLRKLKESFIRRSVNTSPYARFFILEFQDKTDIKTVKDCIYKIQSNWSNLSKRTDRPYSPFLLFHGTSDANLYELKNQLFNEDLIFTDGYPFKGSVFTPKMLIEGFSNKEIHFQFINDIDDFNETLNSINIRKEVYQFYTENCLDIPSQLPQVNIQVKDFADIKEIV
DUF4297 R 394 Escherichia Coli MDRSAVDTIRGYCYQVDKTIIEIFSLPQMDDSIDIECIEDVDVYNDGHLTAIQCKYYESTDYNHSVISKPIRLMLSHFKDNKEKGANYYLYGHYKSGQEKLTLPLKVDFFKSNFLTYTEKKIKHEYHIENGLTEEDLQAFLDRLVININAKSFDDQKKETIQIIKNHFQCEDYEAEHYLYSNAFRKTYDISCNKKDRRIKKSDFVESINKSKVLFNIWFYQYEGRKEYLRKLKESFIRRSVNTSPYARFFILEFQDKTDIKTVKDCIYKIQSNWSNLSKRTDRPYSPFLLFHGTSDANLYELKNQLFNEDLIFTDGYPFKGSVFTPKMLIEGFSNKEIHFQFINDIDDFNETLNSINIRKEVYQFYTENCLDIPSQLPQVNIQVKDFADIKEIV
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-12-05
Deposition Author(s): Deng, Z. , Wang, Y.