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FASTA Sequence PDB Format mmCIF Format
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8X5D

The cryo-em structure of the mycobacterium tuberculosis crispr-csm complex

PDB DOI: 10.2210/pdb8x5d/pdb

Classification: RNA BINDING PROTEIN
Organism(s): Mycobacterium Canettii , Mycobacterium Tuberculosis

Deposited: 2023-11-17
Deposition Author(s): Li, Z.K. , Liu, M.X.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.1 Å

Literature

The cryo-em structure of the mycobacterium tuberculosis crispr-csm complex

Li, Z.K. , Liu, M.X.

Primary Citation of Related Structures: 8X5D


Proteins
Molecule Chains Sequence Length Organism Sequence
CRISPR system Cms endoribonuclease Csm3 K 239 Mycobacterium Canettii , Mycobacterium Tuberculosis MAHMTTSYAKIEITGTLTVLTGLQIGAGDGFSAIGAVDKPVVRDPLSRLPMIPGTSLKGKVRTLLSRQYGADTETFYRKPNEDHAHIRRLFGDTEEYMTGRLVFRDTKLTNKDDLEARGAKTLTEVKFENAINRVTAKANLRQMERVIPGSEFAFSLVYEVSFGTPGEEQKASLPSSDEIIEDFNAIARGLKLLELDYLGGSGTRGYGQVKFSNLKARAAVGALDGSLLEKLNHELAAV
CRISPR system Cms endoribonuclease Csm3 G 239 Mycobacterium Canettii , Mycobacterium Tuberculosis MAHMTTSYAKIEITGTLTVLTGLQIGAGDGFSAIGAVDKPVVRDPLSRLPMIPGTSLKGKVRTLLSRQYGADTETFYRKPNEDHAHIRRLFGDTEEYMTGRLVFRDTKLTNKDDLEARGAKTLTEVKFENAINRVTAKANLRQMERVIPGSEFAFSLVYEVSFGTPGEEQKASLPSSDEIIEDFNAIARGLKLLELDYLGGSGTRGYGQVKFSNLKARAAVGALDGSLLEKLNHELAAV
CRISPR system Cms endoribonuclease Csm3 L 239 Mycobacterium Canettii , Mycobacterium Tuberculosis MAHMTTSYAKIEITGTLTVLTGLQIGAGDGFSAIGAVDKPVVRDPLSRLPMIPGTSLKGKVRTLLSRQYGADTETFYRKPNEDHAHIRRLFGDTEEYMTGRLVFRDTKLTNKDDLEARGAKTLTEVKFENAINRVTAKANLRQMERVIPGSEFAFSLVYEVSFGTPGEEQKASLPSSDEIIEDFNAIARGLKLLELDYLGGSGTRGYGQVKFSNLKARAAVGALDGSLLEKLNHELAAV
CRISPR system Cms endoribonuclease Csm3 J 239 Mycobacterium Canettii , Mycobacterium Tuberculosis MAHMTTSYAKIEITGTLTVLTGLQIGAGDGFSAIGAVDKPVVRDPLSRLPMIPGTSLKGKVRTLLSRQYGADTETFYRKPNEDHAHIRRLFGDTEEYMTGRLVFRDTKLTNKDDLEARGAKTLTEVKFENAINRVTAKANLRQMERVIPGSEFAFSLVYEVSFGTPGEEQKASLPSSDEIIEDFNAIARGLKLLELDYLGGSGTRGYGQVKFSNLKARAAVGALDGSLLEKLNHELAAV
CRISPR system Cms endoribonuclease Csm3 I 239 Mycobacterium Canettii , Mycobacterium Tuberculosis MAHMTTSYAKIEITGTLTVLTGLQIGAGDGFSAIGAVDKPVVRDPLSRLPMIPGTSLKGKVRTLLSRQYGADTETFYRKPNEDHAHIRRLFGDTEEYMTGRLVFRDTKLTNKDDLEARGAKTLTEVKFENAINRVTAKANLRQMERVIPGSEFAFSLVYEVSFGTPGEEQKASLPSSDEIIEDFNAIARGLKLLELDYLGGSGTRGYGQVKFSNLKARAAVGALDGSLLEKLNHELAAV
CRISPR system Cms endoribonuclease Csm3 H 239 Mycobacterium Canettii , Mycobacterium Tuberculosis MAHMTTSYAKIEITGTLTVLTGLQIGAGDGFSAIGAVDKPVVRDPLSRLPMIPGTSLKGKVRTLLSRQYGADTETFYRKPNEDHAHIRRLFGDTEEYMTGRLVFRDTKLTNKDDLEARGAKTLTEVKFENAINRVTAKANLRQMERVIPGSEFAFSLVYEVSFGTPGEEQKASLPSSDEIIEDFNAIARGLKLLELDYLGGSGTRGYGQVKFSNLKARAAVGALDGSLLEKLNHELAAV
CRISPR system Cms protein Csm5 N 378 Mycobacterium Canettii , Mycobacterium Tuberculosis MAHMNTYLKPFELTLRCLGPVFIGSGEKRTSKEYHVEGDRVYFPDMELLYADIPAHKRKSFEAFVMNTDGAQATAPLKEWVEPNAVKLDPAKHRGYEVKIGSIEPRRASRGRGGRMTRKKLTLNEIHAFIKDPLGRPYVPGSTVKGMLRSIYLQSLVHKRTAQPVRVPGHQTREHRQYGERFERKELRKSGRPNTRPQDAVNDLFQAIRVTDSPALRTSDLLICQKMDMNVHGKPDGLPLFRECLAPGTSISHRVVVDTSPTARGGWREGERFLETLAETAASVNQARYAEYRAMYPGVNAIVGPIVYLGGGAGYRSKTFVTDQDDMAKVLDAQFGKVVKHVDKTRELRVSPLVLKRTKIDNICYEMGQCELSIRRAE
Csm2 F 133 Mycobacterium Canettii , Mycobacterium Tuberculosis MAHMSVIQDDYVKQAEQVIRGLPKKNGDFELTTTQLRVLLSLTAQLFDEAQLSSDQNLSPALRDKVQYLRVRFVYQAGREKAVRVFVERAGLLDELAQIGDSRDRLLKFCHYMEALVAYKKFLDPKETSKETE
Csm2 E 133 Mycobacterium Canettii , Mycobacterium Tuberculosis MAHMSVIQDDYVKQAEQVIRGLPKKNGDFELTTTQLRVLLSLTAQLFDEAQLSSDQNLSPALRDKVQYLRVRFVYQAGREKAVRVFVERAGLLDELAQIGDSRDRLLKFCHYMEALVAYKKFLDPKETSKETE
Csm2 D 133 Mycobacterium Canettii , Mycobacterium Tuberculosis MAHMSVIQDDYVKQAEQVIRGLPKKNGDFELTTTQLRVLLSLTAQLFDEAQLSSDQNLSPALRDKVQYLRVRFVYQAGREKAVRVFVERAGLLDELAQIGDSRDRLLKFCHYMEALVAYKKFLDPKETSKETE
Csm2 C 133 Mycobacterium Canettii , Mycobacterium Tuberculosis MAHMSVIQDDYVKQAEQVIRGLPKKNGDFELTTTQLRVLLSLTAQLFDEAQLSSDQNLSPALRDKVQYLRVRFVYQAGREKAVRVFVERAGLLDELAQIGDSRDRLLKFCHYMEALVAYKKFLDPKETSKETE
Csm2 B 133 Mycobacterium Canettii , Mycobacterium Tuberculosis MAHMSVIQDDYVKQAEQVIRGLPKKNGDFELTTTQLRVLLSLTAQLFDEAQLSSDQNLSPALRDKVQYLRVRFVYQAGREKAVRVFVERAGLLDELAQIGDSRDRLLKFCHYMEALVAYKKFLDPKETSKETE

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (47-MER) o 184 NA GUCGUCAGACCCAAAACCCCGAGAGGGGACGGAAACUUAAAACCGUGUUGCACUGCAACCCGGAAUUCUUGCACGUCGUCAGACCCAAAACCCCGAGAGGGGACGGAAACUUAAAACCGUGUUGCACUGCAACCCGGAAUUCUUGCACGUCGUCAGACCCAAAACCCCGAGAGGGGACGGAAAC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-11-17
Deposition Author(s): Li, Z.K. , Liu, M.X.