Cryo-em structure of prefusion-stabilized rsv f (ds-cav1 sc9-10 strain: b18537) in complex with humanized nab 5b11
PDB DOI: 10.2210/pdb8wz5/pdb
Classification: VIRAL PROTEIN Organism(s): Human Respiratory Syncytial Virus B , Mus Musculus
Deposited: 2023-11-01 Deposition Author(s): Li, S. , Liu, L. , Sun, H. , Sun, Y. , Xia, N. , Zheng, Q. , Zheng, Z.
Proteins | ||||
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Molecule | Chains | Sequence Length | Organism | Sequence |
RSV Fusion glycoprotein | A | 492 | Human Respiratory Syncytial Virus B , Mus Musculus | SSQNITEEFYQSTCSAVSRGYFGALRTGWYTSVITIELSNIKEIKCNGTDTKVKLIKQELDKYKNAVTDLQLLMQNPAANNRARREAPQYMNYTINTIKNLNVSISKKRKRRFLGFLLGVGSAICSGIAVCKVLHLEGEVNKIKNALLSTNKAVVSLSNGVSVLTFKVLDLKNYINNRLLPILNQQSCRIPNIETVIEFQQMNSRLLEITREFSVNAGVTTPLSTYMLTNSELLSLINDMPITNDQKKLMSSNVQIVRQQSYSIMCIIKEEVLAYVVQLPIYGVIDTPCWKLHTSPLCTTNIKEGSNICLTRTDRGWYCDNAGSVSFFPQADTCKVQSNRVFCDTMNSLTLPSEVSLCNTDIFNSKYDCKIMTSKTDISSSVITSLGAIVSCYGKTKCTASNKNRGIIKTFSNGCDYVSNKGVDTVSVGNTLYCVNKLEGQNLYVKGEPIINYYDPLVFPSDEFDASISQVNEKINQSLAFIRRSDELLSAI |
RSV Fusion glycoprotein | B | 492 | Human Respiratory Syncytial Virus B , Mus Musculus | SSQNITEEFYQSTCSAVSRGYFGALRTGWYTSVITIELSNIKEIKCNGTDTKVKLIKQELDKYKNAVTDLQLLMQNPAANNRARREAPQYMNYTINTIKNLNVSISKKRKRRFLGFLLGVGSAICSGIAVCKVLHLEGEVNKIKNALLSTNKAVVSLSNGVSVLTFKVLDLKNYINNRLLPILNQQSCRIPNIETVIEFQQMNSRLLEITREFSVNAGVTTPLSTYMLTNSELLSLINDMPITNDQKKLMSSNVQIVRQQSYSIMCIIKEEVLAYVVQLPIYGVIDTPCWKLHTSPLCTTNIKEGSNICLTRTDRGWYCDNAGSVSFFPQADTCKVQSNRVFCDTMNSLTLPSEVSLCNTDIFNSKYDCKIMTSKTDISSSVITSLGAIVSCYGKTKCTASNKNRGIIKTFSNGCDYVSNKGVDTVSVGNTLYCVNKLEGQNLYVKGEPIINYYDPLVFPSDEFDASISQVNEKINQSLAFIRRSDELLSAI |
RSV Fusion glycoprotein | C | 492 | Human Respiratory Syncytial Virus B , Mus Musculus | SSQNITEEFYQSTCSAVSRGYFGALRTGWYTSVITIELSNIKEIKCNGTDTKVKLIKQELDKYKNAVTDLQLLMQNPAANNRARREAPQYMNYTINTIKNLNVSISKKRKRRFLGFLLGVGSAICSGIAVCKVLHLEGEVNKIKNALLSTNKAVVSLSNGVSVLTFKVLDLKNYINNRLLPILNQQSCRIPNIETVIEFQQMNSRLLEITREFSVNAGVTTPLSTYMLTNSELLSLINDMPITNDQKKLMSSNVQIVRQQSYSIMCIIKEEVLAYVVQLPIYGVIDTPCWKLHTSPLCTTNIKEGSNICLTRTDRGWYCDNAGSVSFFPQADTCKVQSNRVFCDTMNSLTLPSEVSLCNTDIFNSKYDCKIMTSKTDISSSVITSLGAIVSCYGKTKCTASNKNRGIIKTFSNGCDYVSNKGVDTVSVGNTLYCVNKLEGQNLYVKGEPIINYYDPLVFPSDEFDASISQVNEKINQSLAFIRRSDELLSAI |
5B11 Fab Heavy Chain | H | 116 | Human Respiratory Syncytial Virus B , Mus Musculus | QIQLVQSGPELKKPGASVKISCKASGYTFTDYSMHWLKQAPGKGLKWMGWITTETGEPTYADDFKGRFAFSLDTSASTAYLQISSLKAEDTGVYFCARYYYGPFYWGQGTLVTVSS |
5B11 Fab Heavy Chain | D | 116 | Human Respiratory Syncytial Virus B , Mus Musculus | QIQLVQSGPELKKPGASVKISCKASGYTFTDYSMHWLKQAPGKGLKWMGWITTETGEPTYADDFKGRFAFSLDTSASTAYLQISSLKAEDTGVYFCARYYYGPFYWGQGTLVTVSS |
5B11 Fab Heavy Chain | E | 116 | Human Respiratory Syncytial Virus B , Mus Musculus | QIQLVQSGPELKKPGASVKISCKASGYTFTDYSMHWLKQAPGKGLKWMGWITTETGEPTYADDFKGRFAFSLDTSASTAYLQISSLKAEDTGVYFCARYYYGPFYWGQGTLVTVSS |
5B11 Fab Light Chain | L | 107 | Human Respiratory Syncytial Virus B , Mus Musculus | DIQMTQSPSSLSASVGDRVTITCRSSGNIHNFLTWYQQKPGKSPQFLVYNAKTLADGVPSRFSGSGSGTQFTLTISSLQPEDFGIYYCQHFWTTPYTFGGGTKVEIK |
5B11 Fab Light Chain | F | 107 | Human Respiratory Syncytial Virus B , Mus Musculus | DIQMTQSPSSLSASVGDRVTITCRSSGNIHNFLTWYQQKPGKSPQFLVYNAKTLADGVPSRFSGSGSGTQFTLTISSLQPEDFGIYYCQHFWTTPYTFGGGTKVEIK |
5B11 Fab Light Chain | G | 107 | Human Respiratory Syncytial Virus B , Mus Musculus | DIQMTQSPSSLSASVGDRVTITCRSSGNIHNFLTWYQQKPGKSPQFLVYNAKTLADGVPSRFSGSGSGTQFTLTISSLQPEDFGIYYCQHFWTTPYTFGGGTKVEIK |
Method: ELECTRON MICROSCOPY