Cryo-em structure of prefusion-stabilized rsv f (ds-cav1 strain: a2) in complex with nab 5b11
PDB DOI: 10.2210/pdb8wz3/pdb
Classification: VIRAL PROTEIN Organism(s): Human Respiratory Syncytial Virus A2 , Mus Musculus
Deposited: 2023-11-01 Deposition Author(s): Li, S. , Liu, L. , Sun, H. , Sun, Y. , Xia, N. , Zheng, Q. , Zheng, Z.
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
5B11 Fab Heavy Chain | D | 116 | Human Respiratory Syncytial Virus A2 , Mus Musculus | QIQLVQSGPELKKPGETVKISCKASGYTFTDYSMHWLKQAPGKGLKWMGWITTETGEPTYADDFKGRFAFSLETSASTAYLQINNLKNEDTGIYFCARYYYGPFYWGQGTLVTVST |
5B11 Fab Heavy Chain | E | 116 | Human Respiratory Syncytial Virus A2 , Mus Musculus | QIQLVQSGPELKKPGETVKISCKASGYTFTDYSMHWLKQAPGKGLKWMGWITTETGEPTYADDFKGRFAFSLETSASTAYLQINNLKNEDTGIYFCARYYYGPFYWGQGTLVTVST |
5B11 Fab Heavy Chain | G | 116 | Human Respiratory Syncytial Virus A2 , Mus Musculus | QIQLVQSGPELKKPGETVKISCKASGYTFTDYSMHWLKQAPGKGLKWMGWITTETGEPTYADDFKGRFAFSLETSASTAYLQINNLKNEDTGIYFCARYYYGPFYWGQGTLVTVST |
5B11 Fab Light Chain | F | 107 | Human Respiratory Syncytial Virus A2 , Mus Musculus | DIQMTQSPASLSASVGETVTITCRSSGNIHNFLTWYQQKQGKSPQFLVYNAKTLADGVSSRFSGSGSGTQFSLKINSLQPEDFGIYYCQHFWTTPYTFGGGTKLEIK |
5B11 Fab Light Chain | H | 107 | Human Respiratory Syncytial Virus A2 , Mus Musculus | DIQMTQSPASLSASVGETVTITCRSSGNIHNFLTWYQQKQGKSPQFLVYNAKTLADGVSSRFSGSGSGTQFSLKINSLQPEDFGIYYCQHFWTTPYTFGGGTKLEIK |
5B11 Fab Light Chain | K | 107 | Human Respiratory Syncytial Virus A2 , Mus Musculus | DIQMTQSPASLSASVGETVTITCRSSGNIHNFLTWYQQKQGKSPQFLVYNAKTLADGVSSRFSGSGSGTQFSLKINSLQPEDFGIYYCQHFWTTPYTFGGGTKLEIK |
RSV Fusion glycoprotein | A | 487 | Human Respiratory Syncytial Virus A2 , Mus Musculus | QNITEEFYQSTCSAVSKGYLSALRTGWYTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQSTPATNNRARRELPRFMNYTLNNAKKTNVTLSKKRKRRFLGFLLGVGSAIASGVAVCKVLHLEGEVNKIKSALLSTNKAVVSLSNGVSVLTFKVLDLKNYIDKQLLPILNKQSCSISNIETVIEFQQKNNRLLEITREFSVNAGVTTPVSTYMLTNSELLSLINDMPITNDQKKLMSNNVQIVRQQSYSIMCIIKEEVLAYVVQLPLYGVIDTPCWKLHTSPLCTTNTKEGSNICLTRTDRGWYCDNAGSVSFFPQAETCKVQSNRVFCDTMNSLTLPSEVNLCNVDIFNPKYDCKIMTSKTDVSSSVITSLGAIVSCYGKTKCTASNKNRGIIKTFSNGCDYVSNKGVDTVSVGNTLYYVNKQEGKSLYVKGEPIINFYDPLVFPSDEFDASISQVNEKINQSLAFIRKSDEL |
RSV Fusion glycoprotein | B | 487 | Human Respiratory Syncytial Virus A2 , Mus Musculus | QNITEEFYQSTCSAVSKGYLSALRTGWYTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQSTPATNNRARRELPRFMNYTLNNAKKTNVTLSKKRKRRFLGFLLGVGSAIASGVAVCKVLHLEGEVNKIKSALLSTNKAVVSLSNGVSVLTFKVLDLKNYIDKQLLPILNKQSCSISNIETVIEFQQKNNRLLEITREFSVNAGVTTPVSTYMLTNSELLSLINDMPITNDQKKLMSNNVQIVRQQSYSIMCIIKEEVLAYVVQLPLYGVIDTPCWKLHTSPLCTTNTKEGSNICLTRTDRGWYCDNAGSVSFFPQAETCKVQSNRVFCDTMNSLTLPSEVNLCNVDIFNPKYDCKIMTSKTDVSSSVITSLGAIVSCYGKTKCTASNKNRGIIKTFSNGCDYVSNKGVDTVSVGNTLYYVNKQEGKSLYVKGEPIINFYDPLVFPSDEFDASISQVNEKINQSLAFIRKSDEL |
RSV Fusion glycoprotein | C | 487 | Human Respiratory Syncytial Virus A2 , Mus Musculus | QNITEEFYQSTCSAVSKGYLSALRTGWYTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQSTPATNNRARRELPRFMNYTLNNAKKTNVTLSKKRKRRFLGFLLGVGSAIASGVAVCKVLHLEGEVNKIKSALLSTNKAVVSLSNGVSVLTFKVLDLKNYIDKQLLPILNKQSCSISNIETVIEFQQKNNRLLEITREFSVNAGVTTPVSTYMLTNSELLSLINDMPITNDQKKLMSNNVQIVRQQSYSIMCIIKEEVLAYVVQLPLYGVIDTPCWKLHTSPLCTTNTKEGSNICLTRTDRGWYCDNAGSVSFFPQAETCKVQSNRVFCDTMNSLTLPSEVNLCNVDIFNPKYDCKIMTSKTDVSSSVITSLGAIVSCYGKTKCTASNKNRGIIKTFSNGCDYVSNKGVDTVSVGNTLYYVNKQEGKSLYVKGEPIINFYDPLVFPSDEFDASISQVNEKINQSLAFIRKSDEL |
Method: ELECTRON MICROSCOPY