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8WUL
Crystal structure of affinity enhanced tcr in complex with hla-a*11:01 bound to kras-g12v peptide (vvgavgvgk)
PDB DOI: 10.2210/pdb8wul/pdb
Classification: IMMUNE SYSTEM Organism(s): Homo Sapiens , Mus Musculus , Synthetic Construct
Deposited: 2023-10-20 Deposition Author(s): Guan, F.H. , Luo, L.J. , Wang, F. , Wang, X.Y. , Xu, W. , Ye, S. , Zhang, J.H. , Zhang, M.Y. , Zhou, X.Y. , Zhu, P.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.36 Å
Crystal structure of affinity enhanced tcr in complex with hla-a*11:01 bound to kras-g12v peptide (vvgavgvgk)
Guan, F.H. , Luo, L.J. , Wang, F. , Wang, X.Y. , Xu, W. , Ye, S. , Zhang, J.H. , Zhang, M.Y. , Zhou, X.Y. , Zhu, P.
Primary Citation of Related Structures: 8WUL
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| TCR alpha chain | C | 198 | Homo Sapiens , Mus Musculus , Synthetic Construct | QQKVQQSPESLIVPEGGMASLNCTSSDRNVDYFWWYRQHSGKSPKMLMSIFSNGEKEEGRFTVHLNKASLHTSLHIRDSQPSDSALYLCAARSSGSWQLIFGSGTQLTVMPDIQNPEPAVYQLKDPRSQDSTLCLFTDFDSQINVPKTMESGTFITDKCVLDMKAMDSKSNGAIAWSNQTSFTCQDIFKETNATYPSS |
| TCR alpha chain | A | 198 | Homo Sapiens , Mus Musculus , Synthetic Construct | QQKVQQSPESLIVPEGGMASLNCTSSDRNVDYFWWYRQHSGKSPKMLMSIFSNGEKEEGRFTVHLNKASLHTSLHIRDSQPSDSALYLCAARSSGSWQLIFGSGTQLTVMPDIQNPEPAVYQLKDPRSQDSTLCLFTDFDSQINVPKTMESGTFITDKCVLDMKAMDSKSNGAIAWSNQTSFTCQDIFKETNATYPSS |
| TCR alpha chain | E | 198 | Homo Sapiens , Mus Musculus , Synthetic Construct | QQKVQQSPESLIVPEGGMASLNCTSSDRNVDYFWWYRQHSGKSPKMLMSIFSNGEKEEGRFTVHLNKASLHTSLHIRDSQPSDSALYLCAARSSGSWQLIFGSGTQLTVMPDIQNPEPAVYQLKDPRSQDSTLCLFTDFDSQINVPKTMESGTFITDKCVLDMKAMDSKSNGAIAWSNQTSFTCQDIFKETNATYPSS |
| TCR alpha chain | G | 198 | Homo Sapiens , Mus Musculus , Synthetic Construct | QQKVQQSPESLIVPEGGMASLNCTSSDRNVDYFWWYRQHSGKSPKMLMSIFSNGEKEEGRFTVHLNKASLHTSLHIRDSQPSDSALYLCAARSSGSWQLIFGSGTQLTVMPDIQNPEPAVYQLKDPRSQDSTLCLFTDFDSQINVPKTMESGTFITDKCVLDMKAMDSKSNGAIAWSNQTSFTCQDIFKETNATYPSS |
| TCR beta chain | D | 239 | Homo Sapiens , Mus Musculus , Synthetic Construct | KIIQKPKYLVAVTGSEKILICEQYLGHNAMYWYRQSAKKPLEFMFSYSYQMLMDNQTASSRFQPQSSKKNHLDLQITALKPDDSATYFCASSQDRGDSAHTLYFGSGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHSGVCTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGLSEEDKWPEGSPKPVTQNISAEAWGRAD |
| TCR beta chain | B | 239 | Homo Sapiens , Mus Musculus , Synthetic Construct | KIIQKPKYLVAVTGSEKILICEQYLGHNAMYWYRQSAKKPLEFMFSYSYQMLMDNQTASSRFQPQSSKKNHLDLQITALKPDDSATYFCASSQDRGDSAHTLYFGSGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHSGVCTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGLSEEDKWPEGSPKPVTQNISAEAWGRAD |
| TCR beta chain | F | 239 | Homo Sapiens , Mus Musculus , Synthetic Construct | KIIQKPKYLVAVTGSEKILICEQYLGHNAMYWYRQSAKKPLEFMFSYSYQMLMDNQTASSRFQPQSSKKNHLDLQITALKPDDSATYFCASSQDRGDSAHTLYFGSGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHSGVCTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGLSEEDKWPEGSPKPVTQNISAEAWGRAD |
| TCR beta chain | H | 239 | Homo Sapiens , Mus Musculus , Synthetic Construct | KIIQKPKYLVAVTGSEKILICEQYLGHNAMYWYRQSAKKPLEFMFSYSYQMLMDNQTASSRFQPQSSKKNHLDLQITALKPDDSATYFCASSQDRGDSAHTLYFGSGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHSGVCTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGLSEEDKWPEGSPKPVTQNISAEAWGRAD |
| MHC class I antigen | L | 274 | Homo Sapiens , Mus Musculus , Synthetic Construct | GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYGCDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW |
| MHC class I antigen | I | 274 | Homo Sapiens , Mus Musculus , Synthetic Construct | GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYGCDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW |
| MHC class I antigen | O | 274 | Homo Sapiens , Mus Musculus , Synthetic Construct | GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYGCDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW |
| MHC class I antigen | R | 274 | Homo Sapiens , Mus Musculus , Synthetic Construct | GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYGCDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW |
| Beta-2-microglobulin | M | 99 | Homo Sapiens , Mus Musculus , Synthetic Construct | IQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM |
| Beta-2-microglobulin | J | 99 | Homo Sapiens , Mus Musculus , Synthetic Construct | IQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM |
| Beta-2-microglobulin | P | 99 | Homo Sapiens , Mus Musculus , Synthetic Construct | IQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM |
| Beta-2-microglobulin | S | 99 | Homo Sapiens , Mus Musculus , Synthetic Construct | IQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM |
| KRAS-G12V nonamer peptide | N | 9 | Homo Sapiens , Mus Musculus , Synthetic Construct | VVGAVGVGK |
| KRAS-G12V nonamer peptide | K | 9 | Homo Sapiens , Mus Musculus , Synthetic Construct | VVGAVGVGK |
| KRAS-G12V nonamer peptide | Q | 9 | Homo Sapiens , Mus Musculus , Synthetic Construct | VVGAVGVGK |
| KRAS-G12V nonamer peptide | T | 9 | Homo Sapiens , Mus Musculus , Synthetic Construct | VVGAVGVGK |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2023-10-20 Deposition Author(s): Guan, F.H. , Luo, L.J. , Wang, F. , Wang, X.Y. , Xu, W. , Ye, S. , Zhang, J.H. , Zhang, M.Y. , Zhou, X.Y. , Zhu, P.