PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8WRP

Cryo-em structure of cas12-1 with 20 nt complementary heteroduplex

PDB DOI: 10.2210/pdb8wrp/pdb

Classification: RNA BINDING PROTEIN/RNA/DNA
Organism(s): Unclassified Sequences

Deposited: 2023-10-16
Deposition Author(s): Kuo, Z. , Xi, Z.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.83 Å

8wrp
Literature

Cryo-em structure of cas12-1 with 20 nt complementary heteroduplex

Kuo, Z. , Xi, Z.

Primary Citation of Related Structures: 8WRP


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (39-MER) b 56 NA CCGUCAACGUUCAACGCUUGCUCGGUUCGCCGAGACUCCCCUACGUGCUGCUGAAG
DNA (28-MER) c 42 NA CTGCCCTTGCAACTTCAGCAGCACGTAGGGGAGAATTGGCCA
DNA (5'-D(P*TP*GP*GP*CP*CP*AP*AP*TP*TP*C)-3') d 42 NA TGGCCAATTCTCCCCTACGTGCTGCTGAAGTTGCAAGGGCAG

Proteins
Molecule Chains Sequence Length Organism Sequence
Cas12-1 A 737 Unclassified Sequences MTPKTETPVGALIKKFFPGKRFQKNYLKDAGKKLKREGEAAAVEYLSGKQEDHPANFCPPAKVNILAQSRPLSEWPINLVSKGVQEYVYGLTAAEREANGDFGTSRKSLDRWFARTGVPTHGYTTVQGLNLILRHTFNRYDGVIKKVETRNEKRRSKATRINVSREADGLPPIEAEPEETAFGPDGKLKERPGINPSIYCYQQVSPVPYNPAKHPALPFSGVDPGAPLPLGTPNRLSIPKGQPGYVPEWQRPHLSTKNKRIRKWYARANWRRKPGRKSVLDEAKLKEAALKEAIPIIVTIGKDWIVMDARGLLRAVYWRGIAKPGLSLKELLGFFSGDPVLDPKRGIATFTFKLGAVAVHSRKPTRGKKSKELLLSMTAEKPHVGLVAIDLGQTNPVAAEFSRVKREGETLQAEPLGQIVLPDDLVKDLTRYRRAWDATEEQIKAEAIVQLPEECRAEVVKVNQMSAEETKHLILDRGVSGDLPWEKMTSNTTFISDHLLAKGVTDQVFFEKKSKGKKKGTETVKRKDYGWVKLLRPRLSQETRKAVNDKTWELKRASTEYVRLSRRKTELARRCVNYIVRETKRWTQCEDIAIVIEDLNVRFFHGSGERPDGWDNFFISKRENRWFIQVLHKAFSDLALHRGLPVIEANPARTSITCIRCGHCDRNNRHGEMFLCLSCNDLRHADREIATRNLTRVAVTGEMIPRRIEPGEQSGDTKKARSARKGKKAVISKREAA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-10-16
Deposition Author(s): Kuo, Z. , Xi, Z.