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8W86
Hla-dq2.5-b/c hordein peptide in complex with dqn0385ae02
PDB DOI: 10.2210/pdb8w86/pdb
Classification: IMMUNE SYSTEM Organism(s): Homo Sapiens
Deposited: 2023-08-31 Deposition Author(s): Fukami, T.A. , Irie, M. , Ishii, S. , Okura, Y. , Takahashi, N. , Teranishi-Ikawa, Y. , Torizawa, T. , Tsushima, T.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.236 Å
Hla-dq2.5-b/c hordein peptide in complex with dqn0385ae02
Fukami, T.A. , Irie, M. , Ishii, S. , Okura, Y. , Takahashi, N. , Teranishi-Ikawa, Y. , Torizawa, T. , Tsushima, T.
Primary Citation of Related Structures: 8W86
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DQN0385AE02 Fab heavy chain | A | 223 | Homo Sapiens | QVQLVESGGGVVQPGRSLRLSCAASGFTFSEWYFMSWVRQAPGKGLEWVASIDTGSGSIDYAGWVEGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDIGIDYNFWGEGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVEDYFPEPVTVSWNSGALTSGVHTFPAVLESSGLYSLSSVVTVPSSSLGTKTYICNVNHKPSNTKVDKRVEPKSCDK |
| DQN0385AE02 Fab heavy chain | E | 223 | Homo Sapiens | QVQLVESGGGVVQPGRSLRLSCAASGFTFSEWYFMSWVRQAPGKGLEWVASIDTGSGSIDYAGWVEGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDIGIDYNFWGEGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVEDYFPEPVTVSWNSGALTSGVHTFPAVLESSGLYSLSSVVTVPSSSLGTKTYICNVNHKPSNTKVDKRVEPKSCDK |
| DQN0385AE02 Fab light chain | B | 213 | Homo Sapiens | DIQMTQSPSSLSASVGDRVTITCQTTQEISSYLNWYQQKPGQPPKLLIYYASTKAEGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCHYGISKVSFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTAKVVCLLNNFYPREAKVQWKVDNALQSGNSKESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| DQN0385AE02 Fab light chain | F | 213 | Homo Sapiens | DIQMTQSPSSLSASVGDRVTITCQTTQEISSYLNWYQQKPGQPPKLLIYYASTKAEGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCHYGISKVSFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTAKVVCLLNNFYPREAKVQWKVDNALQSGNSKESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| HLA class II histocompatibility antigen, DQ alpha 1 chain | C | 189 | Homo Sapiens | EDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWSLPVLRQFRFDPQFALTNIAVLKHNLNSLIKRSNSTAATNEVPEVTVFSKSPVTLGQPNILICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTLLPSAEESYDCKVEHWGLDKPLLKHWEPELEVLFQ |
| HLA class II histocompatibility antigen, DQ alpha 1 chain | G | 189 | Homo Sapiens | EDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWSLPVLRQFRFDPQFALTNIAVLKHNLNSLIKRSNSTAATNEVPEVTVFSKSPVTLGQPNILICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTLLPSAEESYDCKVEHWGLDKPLLKHWEPELEVLFQ |
| MHC class II HLA-DQ-beta-1 - B/C hordein peptide chimeric protein | D | 230 | Homo Sapiens | EPEQPIPEQPQPYPQQPGSGGGGSIEGRGSGGGSRDSPEDFVYQFKGMCYFTNGTERVRLVSRSIYNREEIVRFDSDVGEFRAVTLLGLPAAEYWNSQKDILERKRAAVDRVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPAQIKVRWFRNDQEETAGVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQSPITVEWRALEVLFQ |
| MHC class II HLA-DQ-beta-1 - B/C hordein peptide chimeric protein | H | 230 | Homo Sapiens | EPEQPIPEQPQPYPQQPGSGGGGSIEGRGSGGGSRDSPEDFVYQFKGMCYFTNGTERVRLVSRSIYNREEIVRFDSDVGEFRAVTLLGLPAAEYWNSQKDILERKRAAVDRVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPAQIKVRWFRNDQEETAGVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQSPITVEWRALEVLFQ |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2023-08-31 Deposition Author(s): Fukami, T.A. , Irie, M. , Ishii, S. , Okura, Y. , Takahashi, N. , Teranishi-Ikawa, Y. , Torizawa, T. , Tsushima, T.