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FASTA Sequence PDB Format mmCIF Format
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8W2P

Bsaxi-dna complex i

PDB DOI: 10.2210/pdb8w2p/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Geobacillus Stearothermophilus , Synthetic Construct

Deposited: 2024-02-20
Deposition Author(s): Shen, B.W. , Stoddard, B.L. , Xu, S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.14 Å

8w2p
Literature

Bsaxi-dna complex i

Shen, B.W. , Stoddard, B.L. , Xu, S.

Primary Citation of Related Structures: 8W2P


Proteins
Molecule Chains Sequence Length Organism Sequence
site-specific DNA-methyltransferase (adenine-specific) A 916 Geobacillus Stearothermophilus , Synthetic Construct MKNWQRIVEAKLEQQKHKVAEISLENGTVNYSKKIKHNRNLKALTGDEEIVRAFLIDRLVNELDYKPEYLETEKEYTIKGGHSKINPRVDVLVKDDKGNPFFFIEVKAPNKFEEDKDEIEGQLFALAQAEERDFKTKVKYLVYYTVELIDDEIVDRAIIIDFEKYPTYTDWSNGGFISTGTELTAGYGEPKKQPLIKGHEKYDLRVRIDREEIEGLGRNLHNVLWGGGGTNDSEIFYSLVNIILAKIQDEYEKEDGQEYDFQVYQYGDNVESPQKLFDRINALYKRALREQLNVTDEQKIAEDNVINRNKFPLNKLVYTVQALESLSFLEGRNSLDGKDILGDFFESIIRDGFKQTKGQFFTPTPIVKFILYALQLDKLAIDRLNNDRELPLIIDPSAGSGTFLIEAMKLITKEVKYKQNHKVKSSRQITKRFEELFMPDHNENKWAREYLYGCEINFDLGTASKVNMILHGDGSANIFVQDGLLPFRFYVKETSPNYLETASPDALYGDKEVNGKFDVVVSNPPFSVDLDTQTQREVRNAFLFGDKKNSENLFIERYYQLLKEGGRLGVVLPESVFDTTENKYIRLFIFKYFKVKAVVSLPQVTFEPFTSTKTSLLFAQKKTKEEVEQWNELWDKYGKEWSLLKTRINDYFSYFVKGRPLNKKWAPDVVKDIQEGNEDNIRKNIFRFLKDHIKEEDKNLEIKDLLIKYAEEISSISKHEKETDVFGFYNAWWVFGEVAKELDYPIFMAEAENVGYKRTKKGEKPMPNDLYDLEYAPSTLDCEKVLSSFDIEINALEASKTKLSVEKGLLEEKLKDKEDKENEKIQKRLNKISELLETIENQLDSIRSKKLEVEGILEKYYENNKLKEEYSERDDEELINHFKHGVLYQYRSEDILLRNKTVHKILDEIRQGVIWD
site-specific DNA-methyltransferase (adenine-specific) B 916 Geobacillus Stearothermophilus , Synthetic Construct MKNWQRIVEAKLEQQKHKVAEISLENGTVNYSKKIKHNRNLKALTGDEEIVRAFLIDRLVNELDYKPEYLETEKEYTIKGGHSKINPRVDVLVKDDKGNPFFFIEVKAPNKFEEDKDEIEGQLFALAQAEERDFKTKVKYLVYYTVELIDDEIVDRAIIIDFEKYPTYTDWSNGGFISTGTELTAGYGEPKKQPLIKGHEKYDLRVRIDREEIEGLGRNLHNVLWGGGGTNDSEIFYSLVNIILAKIQDEYEKEDGQEYDFQVYQYGDNVESPQKLFDRINALYKRALREQLNVTDEQKIAEDNVINRNKFPLNKLVYTVQALESLSFLEGRNSLDGKDILGDFFESIIRDGFKQTKGQFFTPTPIVKFILYALQLDKLAIDRLNNDRELPLIIDPSAGSGTFLIEAMKLITKEVKYKQNHKVKSSRQITKRFEELFMPDHNENKWAREYLYGCEINFDLGTASKVNMILHGDGSANIFVQDGLLPFRFYVKETSPNYLETASPDALYGDKEVNGKFDVVVSNPPFSVDLDTQTQREVRNAFLFGDKKNSENLFIERYYQLLKEGGRLGVVLPESVFDTTENKYIRLFIFKYFKVKAVVSLPQVTFEPFTSTKTSLLFAQKKTKEEVEQWNELWDKYGKEWSLLKTRINDYFSYFVKGRPLNKKWAPDVVKDIQEGNEDNIRKNIFRFLKDHIKEEDKNLEIKDLLIKYAEEISSISKHEKETDVFGFYNAWWVFGEVAKELDYPIFMAEAENVGYKRTKKGEKPMPNDLYDLEYAPSTLDCEKVLSSFDIEINALEASKTKLSVEKGLLEEKLKDKEDKENEKIQKRLNKISELLETIENQLDSIRSKKLEVEGILEKYYENNKLKEEYSERDDEELINHFKHGVLYQYRSEDILLRNKTVHKILDEIRQGVIWD
S.BsaXI C 476 Geobacillus Stearothermophilus , Synthetic Construct MGLIQRRNFSTFASEPSVRFDFNYMKSVTPTTEEYYTYKSLFEVVPSTVPTLDESEPFKYAEIGHVSKNGEVFPVTLSFEDRDELNEDLFKKIEKGDIFLPERGNILISAIRPYLNKIVLIKEDDKTDIYFTKAFIQIKPLINSRILYYALRTIFSEKINAVSRQGKGYPTLKEDDLKTIQFSKKVIDNLLAKEEELISNIDALEKDIKELKSIQRSKKEIVDEVFSSHFNINMVELMALDSQRRVDVGLSSISSLNSTIRYSYRWNKMKLIQKYLYRDIDCIEPLGKYILSSNNGWSPESVVGGEGIPILGQEHLEFDGVLNVSPTKATTKTKNNMENFFIQEGDLFISRGNTVDLVGLACVVETEVTEDIIYPDLYIRLKIDEKVIHKKYLALLFNSFFGRLYFKYVSKGKNQTMVKISSNELLNYYLPIPPMEEQLEIVGKIEEQIGAQNEIEKQIEEKRNQIRVIIEETARS

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (41-MER) Top strand of BsaXI cognate DNA substrate d 52 NA AATAAGCTGAATATTGTCGGAACCAAGTCTCCATATGGAATTAATAAGCTAG
DNA (41-MER) Complementary strand of BsaXI DNA substrate e 52 NA CTAGCTTATTAATTCCATATGGAGACTTGGTTCCGACAATATTCAGCTTATT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-02-20
Deposition Author(s): Shen, B.W. , Stoddard, B.L. , Xu, S.