Crystal structure of 2-hydroxyacyl-coa lyase/synthase dhchacs from dehalococcoidia bacterium in the complex with thdp and adp
PDB DOI: 10.2210/pdb8vzj/pdb
Classification: LYASE Organism(s): Dehalococcoidia Bacterium
Deposited: 2024-02-11 Deposition Author(s): Endres, M. , Gade, P. , Gonzalez, R. , Joachimiak, A. , Kim, Y. , Lee, S. , Michalska, K. , Yoshikuni, Y.
Crystal structure of 2-hydroxyacyl-coa lyase/synthase dhchacs from dehalococcoidia bacterium in the complex with thdp and adp
Endres, M. , Gade, P. , Gonzalez, R. , Joachimiak, A. , Kim, Y. , Lee, S. , Michalska, K. , Yoshikuni, Y.
Primary Citation of Related Structures: 8VZJ
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Oxalyl-CoA decarboxylase | A | 554 | Dehalococcoidia Bacterium | SNAMGQITGAQIVARALKQQGVEYMFGIVGIPVIPIAMFAQREGIKFYGFRNEQSASYAAAAVGYLTGRPGVCLGVSGPGMIHGVAGMANAWSNCWPMILIGGANDSYQNGQGAFQEAPQIEAARPFAKYCARPDSLARLPFYVEQAVRTSIYGRPGAVYLDLPGDIITGAMEEEDVHFPPRCPDAPRMMAPQESIDAAMAALKSAERPLVIVGKGAAYSRAENEVREFLETTQLPYLASPMGKGVMPDDHPLSIAPARSAALLGADVILLMGARLNWMMHFGHPPRFDPKVRVIQMDISAEEIGTNVPTEVALVGDAKAITTQLNASLKQQPWQYPSETTWWTGLRKKIDENGATVAEMMADESVPMSYYRVYREIRDLIPNDAIIQNEGASTMDIGRTLMPNFLPRHRLDAGSFGTMGVGLGQAIAAAAVHPDKHVFCIEGDSAFGFSGMEVETAARYGMKNITFIIINNNGIGGGPDTLDPTRVPPSAYTPNAHYEKMAEIYGGKGYFVTEPSQLRPALEEAIKADKPAIVNIMISATSQRKPQQFAWLTR |
Oxalyl-CoA decarboxylase | B | 554 | Dehalococcoidia Bacterium | SNAMGQITGAQIVARALKQQGVEYMFGIVGIPVIPIAMFAQREGIKFYGFRNEQSASYAAAAVGYLTGRPGVCLGVSGPGMIHGVAGMANAWSNCWPMILIGGANDSYQNGQGAFQEAPQIEAARPFAKYCARPDSLARLPFYVEQAVRTSIYGRPGAVYLDLPGDIITGAMEEEDVHFPPRCPDAPRMMAPQESIDAAMAALKSAERPLVIVGKGAAYSRAENEVREFLETTQLPYLASPMGKGVMPDDHPLSIAPARSAALLGADVILLMGARLNWMMHFGHPPRFDPKVRVIQMDISAEEIGTNVPTEVALVGDAKAITTQLNASLKQQPWQYPSETTWWTGLRKKIDENGATVAEMMADESVPMSYYRVYREIRDLIPNDAIIQNEGASTMDIGRTLMPNFLPRHRLDAGSFGTMGVGLGQAIAAAAVHPDKHVFCIEGDSAFGFSGMEVETAARYGMKNITFIIINNNGIGGGPDTLDPTRVPPSAYTPNAHYEKMAEIYGGKGYFVTEPSQLRPALEEAIKADKPAIVNIMISATSQRKPQQFAWLTR |
Oxalyl-CoA decarboxylase | C | 554 | Dehalococcoidia Bacterium | SNAMGQITGAQIVARALKQQGVEYMFGIVGIPVIPIAMFAQREGIKFYGFRNEQSASYAAAAVGYLTGRPGVCLGVSGPGMIHGVAGMANAWSNCWPMILIGGANDSYQNGQGAFQEAPQIEAARPFAKYCARPDSLARLPFYVEQAVRTSIYGRPGAVYLDLPGDIITGAMEEEDVHFPPRCPDAPRMMAPQESIDAAMAALKSAERPLVIVGKGAAYSRAENEVREFLETTQLPYLASPMGKGVMPDDHPLSIAPARSAALLGADVILLMGARLNWMMHFGHPPRFDPKVRVIQMDISAEEIGTNVPTEVALVGDAKAITTQLNASLKQQPWQYPSETTWWTGLRKKIDENGATVAEMMADESVPMSYYRVYREIRDLIPNDAIIQNEGASTMDIGRTLMPNFLPRHRLDAGSFGTMGVGLGQAIAAAAVHPDKHVFCIEGDSAFGFSGMEVETAARYGMKNITFIIINNNGIGGGPDTLDPTRVPPSAYTPNAHYEKMAEIYGGKGYFVTEPSQLRPALEEAIKADKPAIVNIMISATSQRKPQQFAWLTR |
Oxalyl-CoA decarboxylase | D | 554 | Dehalococcoidia Bacterium | SNAMGQITGAQIVARALKQQGVEYMFGIVGIPVIPIAMFAQREGIKFYGFRNEQSASYAAAAVGYLTGRPGVCLGVSGPGMIHGVAGMANAWSNCWPMILIGGANDSYQNGQGAFQEAPQIEAARPFAKYCARPDSLARLPFYVEQAVRTSIYGRPGAVYLDLPGDIITGAMEEEDVHFPPRCPDAPRMMAPQESIDAAMAALKSAERPLVIVGKGAAYSRAENEVREFLETTQLPYLASPMGKGVMPDDHPLSIAPARSAALLGADVILLMGARLNWMMHFGHPPRFDPKVRVIQMDISAEEIGTNVPTEVALVGDAKAITTQLNASLKQQPWQYPSETTWWTGLRKKIDENGATVAEMMADESVPMSYYRVYREIRDLIPNDAIIQNEGASTMDIGRTLMPNFLPRHRLDAGSFGTMGVGLGQAIAAAAVHPDKHVFCIEGDSAFGFSGMEVETAARYGMKNITFIIINNNGIGGGPDTLDPTRVPPSAYTPNAHYEKMAEIYGGKGYFVTEPSQLRPALEEAIKADKPAIVNIMISATSQRKPQQFAWLTR |
Oxalyl-CoA decarboxylase | E | 554 | Dehalococcoidia Bacterium | SNAMGQITGAQIVARALKQQGVEYMFGIVGIPVIPIAMFAQREGIKFYGFRNEQSASYAAAAVGYLTGRPGVCLGVSGPGMIHGVAGMANAWSNCWPMILIGGANDSYQNGQGAFQEAPQIEAARPFAKYCARPDSLARLPFYVEQAVRTSIYGRPGAVYLDLPGDIITGAMEEEDVHFPPRCPDAPRMMAPQESIDAAMAALKSAERPLVIVGKGAAYSRAENEVREFLETTQLPYLASPMGKGVMPDDHPLSIAPARSAALLGADVILLMGARLNWMMHFGHPPRFDPKVRVIQMDISAEEIGTNVPTEVALVGDAKAITTQLNASLKQQPWQYPSETTWWTGLRKKIDENGATVAEMMADESVPMSYYRVYREIRDLIPNDAIIQNEGASTMDIGRTLMPNFLPRHRLDAGSFGTMGVGLGQAIAAAAVHPDKHVFCIEGDSAFGFSGMEVETAARYGMKNITFIIINNNGIGGGPDTLDPTRVPPSAYTPNAHYEKMAEIYGGKGYFVTEPSQLRPALEEAIKADKPAIVNIMISATSQRKPQQFAWLTR |
Oxalyl-CoA decarboxylase | F | 554 | Dehalococcoidia Bacterium | SNAMGQITGAQIVARALKQQGVEYMFGIVGIPVIPIAMFAQREGIKFYGFRNEQSASYAAAAVGYLTGRPGVCLGVSGPGMIHGVAGMANAWSNCWPMILIGGANDSYQNGQGAFQEAPQIEAARPFAKYCARPDSLARLPFYVEQAVRTSIYGRPGAVYLDLPGDIITGAMEEEDVHFPPRCPDAPRMMAPQESIDAAMAALKSAERPLVIVGKGAAYSRAENEVREFLETTQLPYLASPMGKGVMPDDHPLSIAPARSAALLGADVILLMGARLNWMMHFGHPPRFDPKVRVIQMDISAEEIGTNVPTEVALVGDAKAITTQLNASLKQQPWQYPSETTWWTGLRKKIDENGATVAEMMADESVPMSYYRVYREIRDLIPNDAIIQNEGASTMDIGRTLMPNFLPRHRLDAGSFGTMGVGLGQAIAAAAVHPDKHVFCIEGDSAFGFSGMEVETAARYGMKNITFIIINNNGIGGGPDTLDPTRVPPSAYTPNAHYEKMAEIYGGKGYFVTEPSQLRPALEEAIKADKPAIVNIMISATSQRKPQQFAWLTR |
Oxalyl-CoA decarboxylase | G | 554 | Dehalococcoidia Bacterium | SNAMGQITGAQIVARALKQQGVEYMFGIVGIPVIPIAMFAQREGIKFYGFRNEQSASYAAAAVGYLTGRPGVCLGVSGPGMIHGVAGMANAWSNCWPMILIGGANDSYQNGQGAFQEAPQIEAARPFAKYCARPDSLARLPFYVEQAVRTSIYGRPGAVYLDLPGDIITGAMEEEDVHFPPRCPDAPRMMAPQESIDAAMAALKSAERPLVIVGKGAAYSRAENEVREFLETTQLPYLASPMGKGVMPDDHPLSIAPARSAALLGADVILLMGARLNWMMHFGHPPRFDPKVRVIQMDISAEEIGTNVPTEVALVGDAKAITTQLNASLKQQPWQYPSETTWWTGLRKKIDENGATVAEMMADESVPMSYYRVYREIRDLIPNDAIIQNEGASTMDIGRTLMPNFLPRHRLDAGSFGTMGVGLGQAIAAAAVHPDKHVFCIEGDSAFGFSGMEVETAARYGMKNITFIIINNNGIGGGPDTLDPTRVPPSAYTPNAHYEKMAEIYGGKGYFVTEPSQLRPALEEAIKADKPAIVNIMISATSQRKPQQFAWLTR |
Oxalyl-CoA decarboxylase | H | 554 | Dehalococcoidia Bacterium | SNAMGQITGAQIVARALKQQGVEYMFGIVGIPVIPIAMFAQREGIKFYGFRNEQSASYAAAAVGYLTGRPGVCLGVSGPGMIHGVAGMANAWSNCWPMILIGGANDSYQNGQGAFQEAPQIEAARPFAKYCARPDSLARLPFYVEQAVRTSIYGRPGAVYLDLPGDIITGAMEEEDVHFPPRCPDAPRMMAPQESIDAAMAALKSAERPLVIVGKGAAYSRAENEVREFLETTQLPYLASPMGKGVMPDDHPLSIAPARSAALLGADVILLMGARLNWMMHFGHPPRFDPKVRVIQMDISAEEIGTNVPTEVALVGDAKAITTQLNASLKQQPWQYPSETTWWTGLRKKIDENGATVAEMMADESVPMSYYRVYREIRDLIPNDAIIQNEGASTMDIGRTLMPNFLPRHRLDAGSFGTMGVGLGQAIAAAAVHPDKHVFCIEGDSAFGFSGMEVETAARYGMKNITFIIINNNGIGGGPDTLDPTRVPPSAYTPNAHYEKMAEIYGGKGYFVTEPSQLRPALEEAIKADKPAIVNIMISATSQRKPQQFAWLTR |
Method: X-RAY DIFFRACTION
Deposited Date: 2024-02-11 Deposition Author(s): Endres, M. , Gade, P. , Gonzalez, R. , Joachimiak, A. , Kim, Y. , Lee, S. , Michalska, K. , Yoshikuni, Y.