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FASTA Sequence PDB Format mmCIF Format
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8VSJ

Engineered peptide-specific binder in complex with hla-dr1/clip

PDB DOI: 10.2210/pdb8vsj/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Metamycoplasma Arthritidis

Deposited: 2024-01-24
Deposition Author(s): Du, H. , Garcia, K.C. , Huang, P. , Jude, K.M. , Julien, J.-P. , Kassardjian, A. , Yang, X.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.28 Å

8vsj
Literature

Engineered peptide-specific binder in complex with hla-dr1/clip

Du, H. , Garcia, K.C. , Huang, P. , Jude, K.M. , Julien, J.-P. , Kassardjian, A. , Yang, X.

Primary Citation of Related Structures: 8VSJ


Proteins
Molecule Chains Sequence Length Organism Sequence
HLA class II histocompatibility antigen, DR alpha chain A 184 Homo Sapiens , Metamycoplasma Arthritidis IKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFDASR
HLA class II histocompatibility antigen DR beta chain B 192 Homo Sapiens , Metamycoplasma Arthritidis GDTRPRFLWQLKFECHFFNGTERVRLLERCIYNQEESVRFDSDVGEYRAVTELGRPDAEYWNSQKDLLEQRRAAVDTYCRHNYGVGESFTVQRRVEPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRASR
Superantigen C 129 Homo Sapiens , Metamycoplasma Arthritidis MKLRCENPKKASIYLAQNLNNVVFTNKELEDIYDLSNKEETKEVLKKFKEKVNQFYRHAFDIINKYGDKEVFNMMFLKLSVVFDIQRKEANNVEQIKRNIATLDEIMAKADNDLCYFISQWLEHHHHHH
c44H10 Fab heavy chain H 223 Homo Sapiens , Metamycoplasma Arthritidis QVQLKESGPGLVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWAGGSINYNSALMSRLSISKDNFKSQVFLKMSSLQTDDTAMYYCARAYGDYVHYAMDYWGQGTSVTASSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
c44H10 Fab light chain L 214 Homo Sapiens , Metamycoplasma Arthritidis DIQMTQSPSSLSASLGQRVSLTCRASQEISGYLTWLQQKPDGTIKRLVYAASTLDSGVPKRFSGSRSGSDYSLTISSLESEDFADYYCLQYTNYPLTFGAGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Class-II-associated invariant chain peptide P 15 Homo Sapiens , Metamycoplasma Arthritidis PVSKMRMATPLLMQA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-01-24
Deposition Author(s): Du, H. , Garcia, K.C. , Huang, P. , Jude, K.M. , Julien, J.-P. , Kassardjian, A. , Yang, X.