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8VNB

Homing endonuclease i-ppoi-dna complex:reaction at ph8.0 (tris) with 500 um mg2+ for 240s

PDB DOI: 10.2210/pdb8vnb/pdb

Classification: HYDROLASE/DNA
Organism(s): Physarum Polycephalum , Synthetic Construct

Deposited: 2024-01-13
Deposition Author(s): Chang, C. , Gao, Y.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.72 Å

8vnb
Literature

Homing endonuclease i-ppoi-dna complex:reaction at ph8.0 (tris) with 500 um mg2+ for 240s

Chang, C. , Gao, Y.

Primary Citation of Related Structures: 8VNB


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*GP*AP*GP*AP*GP*TP*CP*A)-3') c 8 NA GAGAGTCA
DNA (5'-D(P*GP*AP*GP*AP*GP*TP*CP*A)-3') d 8 NA GAGAGTCA

Proteins
Molecule Chains Sequence Length Organism Sequence
Intron-encoded endonuclease I-PpoI A 162 Physarum Polycephalum , Synthetic Construct ALTNAQILAVIDSWEETVGQFPVITHHVPLGGGLQGTLHCYEIPLAAPYGVGFAKNGPTRWQYKRTINQVVHRWGSHTVPFLLEPDNINGKTCTASHLCHNTRCHNPLHLCWESLDDNKGRNWCPGPNGGCVHAVVCLRQGPLYGPGATVAGPQQRGSHFVV
Intron-encoded endonuclease I-PpoI B 162 Physarum Polycephalum , Synthetic Construct ALTNAQILAVIDSWEETVGQFPVITHHVPLGGGLQGTLHCYEIPLAAPYGVGFAKNGPTRWQYKRTINQVVHRWGSHTVPFLLEPDNINGKTCTASHLCHNTRCHNPLHLCWESLDDNKGRNWCPGPNGGCVHAVVCLRQGPLYGPGATVAGPQQRGSHFVV
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2024-01-13
Deposition Author(s): Chang, C. , Gao, Y.