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8VMO

Homing endonuclease i-ppoi-dna complex:ground state at ph7.0 (k+ mes) with na+

PDB DOI: 10.2210/pdb8vmo/pdb

Classification: HYDROLASE
Organism(s): Haemophilus Influenzae R2846 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2024-01-13
Deposition Author(s): Chang, C. , Gao, Y.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.68 Å

Literature

Homing endonuclease i-ppoi-dna complex:ground state at ph7.0 (k+ mes) with na+

Chang, C. , Gao, Y.

Primary Citation of Related Structures: 8VMO


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*AP*GP*AP*GP*AP*GP*TP*CP*A)-3') c 21 NA TTGACTCTCTTAAGAGAGTCA
DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*AP*GP*AP*GP*AP*GP*TP*CP*A)-3') d 21 NA TTGACTCTCTTAAGAGAGTCA

Proteins
Molecule Chains Sequence Length Organism Sequence
Intron-encoded endonuclease I-PpoI A 162 Haemophilus Influenzae R2846 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) ALTNAQILAVIDSWEETVGQFPVITHHVPLGGGLQGTLHCYEIPLAAPYGVGFAKNGPTRWQYKRTINQVVHRWGSHTVPFLLEPDNINGKTCTASHLCHNTRCHNPLHLCWESLDDNKGRNWCPGPNGGCVHAVVCLRQGPLYGPGATVAGPQQRGSHFVV
Intron-encoded endonuclease I-PpoI B 162 Haemophilus Influenzae R2846 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) ALTNAQILAVIDSWEETVGQFPVITHHVPLGGGLQGTLHCYEIPLAAPYGVGFAKNGPTRWQYKRTINQVVHRWGSHTVPFLLEPDNINGKTCTASHLCHNTRCHNPLHLCWESLDDNKGRNWCPGPNGGCVHAVVCLRQGPLYGPGATVAGPQQRGSHFVV
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2024-01-13
Deposition Author(s): Chang, C. , Gao, Y.