PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8VMN

H3k4me3 nucleosome bound to prc2_aj1-450

PDB DOI: 10.2210/pdb8vmn/pdb

Classification: GENE REGULATION/DNA
Organism(s): Homo Sapiens , Xenopus Laevis , Synthetic Construct

Deposited: 2024-01-13
Deposition Author(s): Cookis, T. , Nogales, E.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.5 Å

8vmn
Literature

H3k4me3 nucleosome bound to prc2_aj1-450

Cookis, T. , Nogales, E.

Primary Citation of Related Structures: 8VMN


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (157-MER) h 157 NA CAGGATGTATATATCTGAGACGTGCCTGGAGACTAGGGAGTAATCCCCTTGGCGGTTTAAACGCGGGGGACAGCGCGTACGTGCGTTTTAGCGGTGCTAGAGCTGTCTACGACCAATTGAGCGGCCTGGGCACCGGGATTCTCCAGCCGCCGGCAGC
DNA (157-MER) d 157 NA GCTGCCGGCGGCTGGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCCCCGCGTTTAAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTCTCAGATATATACATCCTG

Proteins
Molecule Chains Sequence Length Organism Sequence
Histone H3.2 I 136 Homo Sapiens , Xenopus Laevis , Synthetic Construct MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H4 J 103 Homo Sapiens , Xenopus Laevis , Synthetic Construct MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H4 Q 103 Homo Sapiens , Xenopus Laevis , Synthetic Construct MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H2A K 108 Homo Sapiens , Xenopus Laevis , Synthetic Construct AKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKC
Histone H2A R 108 Homo Sapiens , Xenopus Laevis , Synthetic Construct AKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKC
Histone H2B M 96 Homo Sapiens , Xenopus Laevis , Synthetic Construct RKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Histone H2B S 96 Homo Sapiens , Xenopus Laevis , Synthetic Construct RKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Histone H3.2 O 136 Homo Sapiens , Xenopus Laevis , Synthetic Construct MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-01-13
Deposition Author(s): Cookis, T. , Nogales, E.