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FASTA Sequence PDB Format mmCIF Format
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8VHG

Structure of the bmal1/hif2a heterodimer in complex with dna

PDB DOI: 10.2210/pdb8vhg/pdb

Classification: TRANSCRIPTION/DNA
Organism(s): Mus Musculus , Synthetic Construct

Deposited: 2024-01-01
Deposition Author(s): Li, T. , Tsai, K.L.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.6 Å

Literature

Structure of the bmal1/hif2a heterodimer in complex with dna

Li, T. , Tsai, K.L.

Primary Citation of Related Structures: 8VHG


Proteins
Molecule Chains Sequence Length Organism Sequence
Endothelial PAS domain-containing protein 1 A 380 Mus Musculus , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMADKEKKRSSSELRKEKSRDAARCRRSKETEVFYELAHELPLPHSVSSHLDKASIMRLAISFLRTHKLLSSVCSENESEAEADQQMDNLYLKALEGFIAVVTQDGDMIFLSENISKFMGLTQVELTGHSIFDFTHPCDHEEIRENLTLKNGSGFGKKSKDVSTERDFFMRMKCTVTNRGRTVNLKSATWKVLHCTGQVRVYNNCPPHSSLCGSKEPLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRILELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVVFSMDQTES
Basic helix-loop-helix ARNT-like protein 1 B 436 Mus Musculus , Synthetic Construct GRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFASTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHMVPQPANGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTAPPHSMDSMLPSGEGGPKRTHPTVPGIPGGTENLYFQSDYKDDDDK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
Reverse strand DNA containing HRE motif c 24 NA CACGACCCGCACGTACGCAGCTCC
Forward strand DNA containing HRE motif d 24 NA GGAGCTGCGTACGTGCGGGTCGTG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-01-01
Deposition Author(s): Li, T. , Tsai, K.L.