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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8VGK

Cryoem structure of tryptase in complex with engineered conformationally rigid anti-tryptase fab e104.v1.6ds

PDB DOI: 10.2210/pdb8vgk/pdb

Classification: HYDROLASE/IMMUNE SYSTEM
Organism(s): Homo Sapiens

Deposited: 2023-12-27
Deposition Author(s): Johnson, M.C. , Kung, J.E. , Sudhamsu, J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.4 Å

8vgk
Literature

Cryoem structure of tryptase in complex with engineered conformationally rigid anti-tryptase fab e104.v1.6ds

Johnson, M.C. , Kung, J.E. , Sudhamsu, J.

Primary Citation of Related Structures: 8VGK


Proteins
Molecule Chains Sequence Length Organism Sequence
Tryptase alpha/beta-1 A 245 Homo Sapiens IVGGQEAPRSKWPWQVSLRVHGPYWMHFCGGSLIHPQWVLTAAHCVGPDVKDLAALRVQLREQHLYYQDQLLPVSRIIVHPQFYTAQIGADIALLELEEPVNVSSHVHTVTLPPASETFPPGMPCWVTGWGDVDNDERLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIVRDDMLCAGNTRRDSCQGDSGGPLVCKVNGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHHYVPKKP
Tryptase alpha/beta-1 B 245 Homo Sapiens IVGGQEAPRSKWPWQVSLRVHGPYWMHFCGGSLIHPQWVLTAAHCVGPDVKDLAALRVQLREQHLYYQDQLLPVSRIIVHPQFYTAQIGADIALLELEEPVNVSSHVHTVTLPPASETFPPGMPCWVTGWGDVDNDERLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIVRDDMLCAGNTRRDSCQGDSGGPLVCKVNGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHHYVPKKP
Tryptase alpha/beta-1 C 245 Homo Sapiens IVGGQEAPRSKWPWQVSLRVHGPYWMHFCGGSLIHPQWVLTAAHCVGPDVKDLAALRVQLREQHLYYQDQLLPVSRIIVHPQFYTAQIGADIALLELEEPVNVSSHVHTVTLPPASETFPPGMPCWVTGWGDVDNDERLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIVRDDMLCAGNTRRDSCQGDSGGPLVCKVNGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHHYVPKKP
Tryptase alpha/beta-1 D 245 Homo Sapiens IVGGQEAPRSKWPWQVSLRVHGPYWMHFCGGSLIHPQWVLTAAHCVGPDVKDLAALRVQLREQHLYYQDQLLPVSRIIVHPQFYTAQIGADIALLELEEPVNVSSHVHTVTLPPASETFPPGMPCWVTGWGDVDNDERLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIVRDDMLCAGNTRRDSCQGDSGGPLVCKVNGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHHYVPKKP
Fab E104.v1.6DS light chain E 217 Homo Sapiens DIQMTQSPSSLSASVGDRVTITCQSIKSVYNNRLGWYQQKCGKAPKLLIYETSILTSGVPSRFSGSGSGTDFTLTISSLQCEDFATYYCAGGFDRSGDTTFGQGTKVEIKRTVAAPSVCIFPPSDECLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTCQDSKDCTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Fab E104.v1.6DS light chain G 217 Homo Sapiens DIQMTQSPSSLSASVGDRVTITCQSIKSVYNNRLGWYQQKCGKAPKLLIYETSILTSGVPSRFSGSGSGTDFTLTISSLQCEDFATYYCAGGFDRSGDTTFGQGTKVEIKRTVAAPSVCIFPPSDECLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTCQDSKDCTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Fab E104.v1.6DS light chain I 217 Homo Sapiens DIQMTQSPSSLSASVGDRVTITCQSIKSVYNNRLGWYQQKCGKAPKLLIYETSILTSGVPSRFSGSGSGTDFTLTISSLQCEDFATYYCAGGFDRSGDTTFGQGTKVEIKRTVAAPSVCIFPPSDECLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTCQDSKDCTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Fab E104.v1.6DS light chain L 217 Homo Sapiens DIQMTQSPSSLSASVGDRVTITCQSIKSVYNNRLGWYQQKCGKAPKLLIYETSILTSGVPSRFSGSGSGTDFTLTISSLQCEDFATYYCAGGFDRSGDTTFGQGTKVEIKRTVAAPSVCIFPPSDECLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTCQDSKDCTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Fab E104.v1.6DS light chain F 239 Homo Sapiens EVQLVESGPGCVKPSETLSLTCTVSRFSLIGYAITWIRQPPGKGLEWIGGISSAATTFYSSWAKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARDPRGYGAALDRLDLWGQGTCVTVSSFASTKGPSVCPLAPSSKSTSGGTACLGCLVKDYFCECPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTHHHHHHP
Fab E104.v1.6DS light chain H 239 Homo Sapiens EVQLVESGPGCVKPSETLSLTCTVSRFSLIGYAITWIRQPPGKGLEWIGGISSAATTFYSSWAKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARDPRGYGAALDRLDLWGQGTCVTVSSFASTKGPSVCPLAPSSKSTSGGTACLGCLVKDYFCECPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTHHHHHHP
Fab E104.v1.6DS light chain J 239 Homo Sapiens EVQLVESGPGCVKPSETLSLTCTVSRFSLIGYAITWIRQPPGKGLEWIGGISSAATTFYSSWAKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARDPRGYGAALDRLDLWGQGTCVTVSSFASTKGPSVCPLAPSSKSTSGGTACLGCLVKDYFCECPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTHHHHHHP
Fab E104.v1.6DS light chain K 239 Homo Sapiens EVQLVESGPGCVKPSETLSLTCTVSRFSLIGYAITWIRQPPGKGLEWIGGISSAATTFYSSWAKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARDPRGYGAALDRLDLWGQGTCVTVSSFASTKGPSVCPLAPSSKSTSGGTACLGCLVKDYFCECPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTHHHHHHP
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-12-27
Deposition Author(s): Johnson, M.C. , Kung, J.E. , Sudhamsu, J.