8VDJ
Crystal structure of sars-cov-2 3cl protease (3clpro) as a covalent complex with edp-235
PDB DOI: 10.2210/pdb8vdj/pdb
Classification: VIRAL PROTEIN,HYDROLASE/INHIBITOR Organism(s): Severe Acute Respiratory Syndrome Coronavirus 2
Deposited: 2023-12-15 Deposition Author(s): Cade, I.A. , Rhodin, M.H.J.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.002 Å
Crystal structure of sars-cov-2 3cl protease (3clpro) as a covalent complex with edp-235
Primary Citation of Related Structures: 8VDJ
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 3C-like proteinase nsp5 | A | 306 | Severe Acute Respiratory Syndrome Coronavirus 2 | SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQ |
| 3C-like proteinase nsp5 | B | 306 | Severe Acute Respiratory Syndrome Coronavirus 2 | SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQ |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2023-12-15 Deposition Author(s): Cade, I.A. , Rhodin, M.H.J.