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FASTA Sequence PDB Format mmCIF Format
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8VCR

Sars-cov-2 spike s2 bound to fab 54043-5

PDB DOI: 10.2210/pdb8vcr/pdb

Classification: VIRAL PROTEIN
Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2

Deposited: 2023-12-14
Deposition Author(s): Johnson, N.V. , Mclellan, J.S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.0 Å

8vcr
Literature

Sars-cov-2 spike s2 bound to fab 54043-5

Johnson, N.V. , Mclellan, J.S.

Primary Citation of Related Structures: 8VCR


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike protein S2 A 597 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 MRPTWAWWLFLVLLLALWAPARGASQMSLGAENCVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYCTPPIKDFGGFNFSQILPDPSKPSKRSPIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGPALQIPFPMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTPSALGKLQDVVNQNAEALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGRSLEVLFQGPGHHHHHHHHSAWSHPQFEK
Spike protein S2 B 597 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 MRPTWAWWLFLVLLLALWAPARGASQMSLGAENCVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYCTPPIKDFGGFNFSQILPDPSKPSKRSPIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGPALQIPFPMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTPSALGKLQDVVNQNAEALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGRSLEVLFQGPGHHHHHHHHSAWSHPQFEK
Spike protein S2 C 597 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 MRPTWAWWLFLVLLLALWAPARGASQMSLGAENCVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYCTPPIKDFGGFNFSQILPDPSKPSKRSPIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGPALQIPFPMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTPSALGKLQDVVNQNAEALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGRSLEVLFQGPGHHHHHHHHSAWSHPQFEK
54043-5 Fab Heavy Chain D 233 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 QVQLQESGPGLVKPSQTLSLTCTVSGDSISNSSYYWSWIRQYPSRRLEWIGYIYYNGRTYYNPSLNSRLSISLDTSKNHFSLKLSSLTAADTALYYCARGFLGYCAGGSCFLNWLDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
54043-5 Fab Heavy Chain E 233 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 QVQLQESGPGLVKPSQTLSLTCTVSGDSISNSSYYWSWIRQYPSRRLEWIGYIYYNGRTYYNPSLNSRLSISLDTSKNHFSLKLSSLTAADTALYYCARGFLGYCAGGSCFLNWLDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
54043-5 Fab Heavy Chain H 233 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 QVQLQESGPGLVKPSQTLSLTCTVSGDSISNSSYYWSWIRQYPSRRLEWIGYIYYNGRTYYNPSLNSRLSISLDTSKNHFSLKLSSLTAADTALYYCARGFLGYCAGGSCFLNWLDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
54043-5 Fab Light Chain F 214 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 EIIMTQSPATLSVSPGGRATLSCRASQSVSNNLAWYQQKPGQTPRLLIHGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCHQYHNWLLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
54043-5 Fab Light Chain G 214 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 EIIMTQSPATLSVSPGGRATLSCRASQSVSNNLAWYQQKPGQTPRLLIHGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCHQYHNWLLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
54043-5 Fab Light Chain L 214 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 EIIMTQSPATLSVSPGGRATLSCRASQSVSNNLAWYQQKPGQTPRLLIHGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCHQYHNWLLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-12-14
Deposition Author(s): Johnson, N.V. , Mclellan, J.S.