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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8V5P

Crystal structure of the c-terminal domain of the vzv ge ectodomain in complex with the fab of human antibody 5a2

PDB DOI: 10.2210/pdb8v5p/pdb

Classification: VIRAL PROTEIN
Organism(s): Homo Sapiens , Human Alphaherpesvirus 3

Deposited: 2023-11-30
Deposition Author(s): Harshbarger, W. , Malito, E.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 4.33 Å

8v5p
Literature

Crystal structure of the c-terminal domain of the vzv ge ectodomain in complex with the fab of human antibody 5a2

Harshbarger, W. , Malito, E.

Primary Citation of Related Structures: 8V5P


Proteins
Molecule Chains Sequence Length Organism Sequence
Envelope glycoprotein E A 254 Homo Sapiens , Human Alphaherpesvirus 3 MGTVNKPVVGVLMGFGIITGTLRITNPVRAAVTPQPRGAEFHMWNYHSHVFSVGDTFSLAMHLQYKIHEAPFDLLLEWLYVPIDPTCQPMRLYSTCLYHPNAPQCLSHMNSGCTFTSPHLAQRVASTVYQNCEHADNYTAYCLGISHMEPSFGLILHDGGTTLKFVDTPESLSGLYVFVVYFNGHVEAVAYTVVSTVDHFVNAIEERGFPPTAGQPPATTKPKEITPVNPGTSPLIRYAAWTGGLAGSHHHHHH
Envelope glycoprotein E D 254 Homo Sapiens , Human Alphaherpesvirus 3 MGTVNKPVVGVLMGFGIITGTLRITNPVRAAVTPQPRGAEFHMWNYHSHVFSVGDTFSLAMHLQYKIHEAPFDLLLEWLYVPIDPTCQPMRLYSTCLYHPNAPQCLSHMNSGCTFTSPHLAQRVASTVYQNCEHADNYTAYCLGISHMEPSFGLILHDGGTTLKFVDTPESLSGLYVFVVYFNGHVEAVAYTVVSTVDHFVNAIEERGFPPTAGQPPATTKPKEITPVNPGTSPLIRYAAWTGGLAGSHHHHHH
Envelope glycoprotein E G 254 Homo Sapiens , Human Alphaherpesvirus 3 MGTVNKPVVGVLMGFGIITGTLRITNPVRAAVTPQPRGAEFHMWNYHSHVFSVGDTFSLAMHLQYKIHEAPFDLLLEWLYVPIDPTCQPMRLYSTCLYHPNAPQCLSHMNSGCTFTSPHLAQRVASTVYQNCEHADNYTAYCLGISHMEPSFGLILHDGGTTLKFVDTPESLSGLYVFVVYFNGHVEAVAYTVVSTVDHFVNAIEERGFPPTAGQPPATTKPKEITPVNPGTSPLIRYAAWTGGLAGSHHHHHH
Envelope glycoprotein E C 254 Homo Sapiens , Human Alphaherpesvirus 3 MGTVNKPVVGVLMGFGIITGTLRITNPVRAAVTPQPRGAEFHMWNYHSHVFSVGDTFSLAMHLQYKIHEAPFDLLLEWLYVPIDPTCQPMRLYSTCLYHPNAPQCLSHMNSGCTFTSPHLAQRVASTVYQNCEHADNYTAYCLGISHMEPSFGLILHDGGTTLKFVDTPESLSGLYVFVVYFNGHVEAVAYTVVSTVDHFVNAIEERGFPPTAGQPPATTKPKEITPVNPGTSPLIRYAAWTGGLAGSHHHHHH
5A2 Fab heavy chain H 242 Homo Sapiens , Human Alphaherpesvirus 3 QVQLQESGPGLVKPSETLSLTCIVSGGSISRYYWSWIRQPPGRGLEWIGNIYYTGTTNYNPSLQSRVTISLDTSKNQFSLRLTSVTAADTAVYYCARIGGVSFGERPIDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGSENLYFQGSHHHHHH
5A2 Fab heavy chain E 242 Homo Sapiens , Human Alphaherpesvirus 3 QVQLQESGPGLVKPSETLSLTCIVSGGSISRYYWSWIRQPPGRGLEWIGNIYYTGTTNYNPSLQSRVTISLDTSKNQFSLRLTSVTAADTAVYYCARIGGVSFGERPIDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGSENLYFQGSHHHHHH
5A2 Fab heavy chain J 242 Homo Sapiens , Human Alphaherpesvirus 3 QVQLQESGPGLVKPSETLSLTCIVSGGSISRYYWSWIRQPPGRGLEWIGNIYYTGTTNYNPSLQSRVTISLDTSKNQFSLRLTSVTAADTAVYYCARIGGVSFGERPIDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGSENLYFQGSHHHHHH
5A2 Fab heavy chain F 242 Homo Sapiens , Human Alphaherpesvirus 3 QVQLQESGPGLVKPSETLSLTCIVSGGSISRYYWSWIRQPPGRGLEWIGNIYYTGTTNYNPSLQSRVTISLDTSKNQFSLRLTSVTAADTAVYYCARIGGVSFGERPIDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGSENLYFQGSHHHHHH
5A2 Fab Light Chain L 210 Homo Sapiens , Human Alphaherpesvirus 3 DIQMTQSPSSLSASVGDRVTITCRASQTISTYLNWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTITSLQPEDFAAYYCQQSYSIPLTFGGGTKVEIKGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
5A2 Fab Light Chain Y 210 Homo Sapiens , Human Alphaherpesvirus 3 DIQMTQSPSSLSASVGDRVTITCRASQTISTYLNWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTITSLQPEDFAAYYCQQSYSIPLTFGGGTKVEIKGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
5A2 Fab Light Chain X 210 Homo Sapiens , Human Alphaherpesvirus 3 DIQMTQSPSSLSASVGDRVTITCRASQTISTYLNWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTITSLQPEDFAAYYCQQSYSIPLTFGGGTKVEIKGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
5A2 Fab Light Chain I 210 Homo Sapiens , Human Alphaherpesvirus 3 DIQMTQSPSSLSASVGDRVTITCRASQTISTYLNWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTITSLQPEDFAAYYCQQSYSIPLTFGGGTKVEIKGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2023-11-30
Deposition Author(s): Harshbarger, W. , Malito, E.