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FASTA Sequence PDB Format mmCIF Format
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8V1U

Human dna ligase i f872a bound to adenylated nicked dna with a 5' terminal ribonucleotide

PDB DOI: 10.2210/pdb8v1u/pdb

Classification: LIGASE/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2023-11-21
Deposition Author(s): Tumbale, P.P. , Williams, R.S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2 Å

8v1u
Literature

Human dna ligase i f872a bound to adenylated nicked dna with a 5' terminal ribonucleotide

Tumbale, P.P. , Williams, R.S.

Primary Citation of Related Structures: 8V1U


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA ligase 1 A 647 Homo Sapiens , Synthetic Construct SNDMDPSGYNPAKNNYHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLYLSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRLMLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLTPPGQEFPPAMVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGISEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGFSDEELEEHHQSLKALVLPSPRPYVRIDGAVIPDHWLDPSAVWEVKCADLSLSPIYPAARGLVDSDKGISLRAPRFIRVREDKQPEQATTSAQVACLYRKQSQIQ

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*TP*C)-3') b 11 NA GCTGATGCGTC
DNA/RNA (5'-R(P*G)-D(P*TP*CP*GP*GP*AP*C)-3') c 7 NA GTCGGAC
DNA (5'-D(*GP*TP*CP*CP*GP*AP*CP*GP*AP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3') d 18 NA GTCCGACGACGCATCAGC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2023-11-21
Deposition Author(s): Tumbale, P.P. , Williams, R.S.