8UZA
Cryo-em structure of geocas9 in complex with sgrna and target dna
PDB DOI: 10.2210/pdb8uza/pdb
Classification: HYDROLASE/RNA/DNA Organism(s): Geobacillus Stearothermophilus , Synthetic Construct
Deposited: 2023-11-14 Deposition Author(s): Doudna, J.A. , Eggers, A.R. , Soczek, K.M. , Tuck, O.T.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.17 Å
Cryo-em structure of geocas9 in complex with sgrna and target dna
Doudna, J.A. , Eggers, A.R. , Soczek, K.M. , Tuck, O.T.
Primary Citation of Related Structures: 8UZA
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| CRISPR-associated endonuclease Cas9 | A | 1087 | Geobacillus Stearothermophilus , Synthetic Construct | MRYKIGLAIGITSVGWAVMNLDIPRIEDLGVRIFDRAENPQTGESLALPRRLARSARRRLRRRKHRLERIRRLVIREGILTKEELDKLFEEKHEIDVWQLRVEALDRKLNNDELARVLLHLAKRRGFKSNRKSERSNKENSTMLKHIEENRAILSSYRTVGEMIVKDPKFALHKRNKGENYTNTIARDDLEREIRLIFSKQREFGNMSCTEEFENEYITIWASQRPVASKDDIEKKVGFCTFEPKEKRAPKATYTFQSFIAWEHINKLRLISPSGARGLTDEERRLLYEQAFQKNKITYHDIRTLLHLPDDTYFKGIVYDRGESRKQNENIRFLELDAYHQIRKAVDKVYGKGKSSSFLPIDFDTFGYALTLFKDDADIHSYLRNEYEQNGKRMPNLANKVYDNELIEELLNLSFTKFGHLSLKALRSILPYMEQGEVYSSACERAGYTFTGPKKKQKTMLLPNIPPIANPVVMRALTQARKVVNAIIKKYGSPVSIHIELARDLSQTFDERRKTKKEQDENRKKNETAIRQLMEYGLTLNPTGHDIVKFKLWSEQNGRCAYSLQPIEIERLLEPGYVEVDAVIPYSRSLDDSYTNKVLVLTRENREKGNRIPAEYLGVGTERWQQFETFVLTNKQFSKKKRDRLLRLHYDENEETEFKNRNLNDTRYISRFFANFIREHLKFAESDDKQKVYTVNGRVTAHLRSRWEFNKNREESDLHHAVDAVIVACTTPSDIAKVTAFYQRREQNKELAKKTEPHFPQPWPHFADELRARLSKHPKESIKALNLGNYDDQKLESLQPVFVSRMPKRSVTGAAHQETLRRYVGIDERSGKIQTVVKTKLSEIKLDASGHFPMYGKESDPRTYEAIRQRLLEHNNDPKKAFQEPLYKPKKNGEPGPVIRTVKIIDTKNQVIPLNDGKTVAYNSNIVRVDVFEKDGKYYCVPVYTMDIMKGILPNKAIEPNKPYSEWKEMTEDYTFRFSLYPNDLIRIELPREKTVKTAAGEEINVKDVFVYYKTIDSANGGLELISHDHRFSLRGVGSRTLKRFEKYQVDVLGNIYKVRGEKRVGLASSAHSKPGKTIRPLQSTRD |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| sgRNA (107-MER) | b | 139 | NA | CACUGCAUUCUAGUUGUGGUUGUCAUAGUUCCCCUGAGAAAUCAGGGUUACUAUGAUAAGGGCUUUCUGCCUAAGGCAGACUGACCCGCGGCGUUGGGGAUCGCCUGUCGCCCGCUUUUGGCGGGCAUUCCCCAUCCUU |
| Target strand DNA | c | 51 | NA | TACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGC |
| Non-target strand DNA | d | 51 | NA | GCATTTTTTTCACTGCATTCTAGTTGTGGTTTGTCCAAACTCATCAATGTA |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2023-11-14 Deposition Author(s): Doudna, J.A. , Eggers, A.R. , Soczek, K.M. , Tuck, O.T.