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FASTA Sequence PDB Format mmCIF Format
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8UXQ

Structure of heterochromatin protein 1 (hp1) alpha in complex with an h2a.z nucleosome

PDB DOI: 10.2210/pdb8uxq/pdb

Classification: STRUCTURAL PROTEIN
Organism(s): Homo Sapiens , Mus Musculus , Xenopus Laevis , Synthetic Construct

Deposited: 2023-11-09
Deposition Author(s): Sokolova, V. , Tan, D.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 6.3 Å

8uxq
Literature

Structure of heterochromatin protein 1 (hp1) alpha in complex with an h2a.z nucleosome

Sokolova, V. , Tan, D.

Primary Citation of Related Structures: 8UXQ


Proteins
Molecule Chains Sequence Length Organism Sequence
Chromobox protein homolog 5 A 195 Homo Sapiens , Mus Musculus , Xenopus Laevis , Synthetic Construct GSPEFGKKTKRTADSSSSEDEEEYVVEKVLDRRVVKGQVEYLLKWKGFSEEHNTWEPEKNLDCPELISEFMKKYKKMKEGENNKPREKSESNKRKSNFSNSADDIKSKKKREQSNDIARGFERGLEPEKIIGATDSCGDLMFLMKWKDTDEADLVLAKEANVKCPQIVIAFYEERLTWHAYPEDAENKEKETAKS
Chromobox protein homolog 5 C 195 Homo Sapiens , Mus Musculus , Xenopus Laevis , Synthetic Construct GSPEFGKKTKRTADSSSSEDEEEYVVEKVLDRRVVKGQVEYLLKWKGFSEEHNTWEPEKNLDCPELISEFMKKYKKMKEGENNKPREKSESNKRKSNFSNSADDIKSKKKREQSNDIARGFERGLEPEKIIGATDSCGDLMFLMKWKDTDEADLVLAKEANVKCPQIVIAFYEERLTWHAYPEDAENKEKETAKS
Histone H3.2 E 135 Homo Sapiens , Mus Musculus , Xenopus Laevis , Synthetic Construct ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H3.2 K 135 Homo Sapiens , Mus Musculus , Xenopus Laevis , Synthetic Construct ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H4 F 102 Homo Sapiens , Mus Musculus , Xenopus Laevis , Synthetic Construct SGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H4 L 102 Homo Sapiens , Mus Musculus , Xenopus Laevis , Synthetic Construct SGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H2A.Z G 127 Homo Sapiens , Mus Musculus , Xenopus Laevis , Synthetic Construct AGGKAGKDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQKTV
Histone H2A.Z M 127 Homo Sapiens , Mus Musculus , Xenopus Laevis , Synthetic Construct AGGKAGKDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQKTV
Histone H2B 1.1 H 125 Homo Sapiens , Mus Musculus , Xenopus Laevis , Synthetic Construct PEPAKSAPAPKKGSKKAVTKTQKKDGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Histone H2B 1.1 N 125 Homo Sapiens , Mus Musculus , Xenopus Laevis , Synthetic Construct PEPAKSAPAPKKGSKKAVTKTQKKDGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA Widom601 (208bp) strand1 i 208 NA ACTCCGGCAAGGTCGCTGTTCAATACATGCACAGGATGTATATATCTGACACGTGCCTGGAGACTAGGGAGTAATCCCCTTGGCGGTTAAAACGCGGGGGACAGCGCGTACGTGCGTTTAAGCGGTGCTAGAGCTGTCTACGACCAATTGAGCGGCCTCGGCACCGGGATTCTCCAGGGCGGCCGCGTATAGGGTCCATCACATAAGT
DNA Widom601 (208bp) strand2 j 208 NA ACTTATGTGATGGACCCTATACGCGGCCGCCCTGGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCCCCGCGTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATCCTGTGCATGTATTGAACAGCGACCTTGCCGGAGT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-11-09
Deposition Author(s): Sokolova, V. , Tan, D.