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FASTA Sequence PDB Format mmCIF Format
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8UP5

Structure of the keops complex (cgi121/bud32/kae1/pcc1) bound to trna in its native-like conformation.

PDB DOI: 10.2210/pdb8up5/pdb

Classification: RNA BINDING PROTEIN/RNA
Organism(s): Methanocaldococcus Jannaschii , Pyrococcus Furiosus Dsm 3638

Deposited: 2023-10-21
Deposition Author(s): Beenstock, J. , Daou, S. , Keszei, A.F.A. , Ona Chuquimarca, S.M. , Sicheri, F. , Yin, Z.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.56 Å

8up5
Literature

Structure of the keops complex (cgi121/bud32/kae1/pcc1) bound to trna in its native-like conformation.

Beenstock, J. , Daou, S. , Keszei, A.F.A. , Ona Chuquimarca, S.M. , Sicheri, F. , Yin, Z.

Primary Citation of Related Structures: 8UP5


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
tRNA t 77 NA GGGCCCGUAGCUCAGUCUGGCAGAGCGCCUGGCUUUUAACCAGGUGGUCGAGGGUUCAAAUCCCUUCGGGCCCGCCA

Proteins
Molecule Chains Sequence Length Organism Sequence
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein B 203 Methanocaldococcus Jannaschii , Pyrococcus Furiosus Dsm 3638 KIPEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIEDNLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDKDLYIIDFGLGKISNLDRDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYVE
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein K 325 Methanocaldococcus Jannaschii , Pyrococcus Furiosus Dsm 3638 PMICLGLEGTAEKTGVGIVTSDGEVLFNKTIMYKPPKQGINPREAADHHAETFPKLIKEAFEVVDKNEIDLIAFSQGPGLGPSLRVTATVARTLSLTLKKPIIGVNHCIAHIEIGKLTTEAEDPLTLYVSGGNTQVIAYVSKKYRVFGETLDIAVGNCLDQFARYVNLPHPGGPYIEELARKGKKLVDLPYTVKGMDIAFSGLLTAAMRAYDAGERLEDICYSLQEYAFSMLTEITERALAHTNKGEVMLVGGVAANNRLREMLKAMCEGQNVDFYVPPKEFCGDNGAMIAWLGLLMHKNGRWMSLDETKIIPNYRTDMVEVNWI
Regulatory protein Cgi121 C 148 Methanocaldococcus Jannaschii , Pyrococcus Furiosus Dsm 3638 MDPMIIRGIRGARINNEIFNLGLKFQILNADVVATKKHVLHAINQAKTKKPIAKSFWMEILVRASGQRQIHEAIKIIGAKDGNVCLICEDEETFRKIYELIGGEIDDSVLEINEDKERLIREIFKIRGFGNVVERVLEKIALIELKKE
KEOPS complex subunit Pcc1 P 175 Methanocaldococcus Jannaschii , Pyrococcus Furiosus Dsm 3638 MKAKRVQAKIEIEFPSEDVAKVVYEAVLYEHLSVPYRRSEIDFKLEGKKIILDIKATDSSALRGTVNSYLRWIKAAIDVIEVGSGSGSGSGSGMKAKRVQAKIEIEFPSEDVAKVVYEAVLYEHLSVPYRRSEIDFKLEGKKIILDIKATDSSALRGTVNSYLRWIKYAIDRIEV
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-10-21
Deposition Author(s): Beenstock, J. , Daou, S. , Keszei, A.F.A. , Ona Chuquimarca, S.M. , Sicheri, F. , Yin, Z.