8UNF
Cryo-em structure of t4 bacteriophage clamp loader with sliding clamp and dna
PDB DOI: 10.2210/pdb8unf/pdb
Classification: REPLICATION Organism(s): Tequatrovirus T4 , Synthetic Construct
Deposited: 2023-10-18 Deposition Author(s): Gee, L.C. , Ghaffari-Kashani, S. , Gorday, K. , Huang, Y. , Kuriyan, J. , Luo, X. , Marcus, K. , O'Donnell, M. , Subramanian, S. , Subramanian, S. , Zhang, L.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.15 Å
Cryo-em structure of t4 bacteriophage clamp loader with sliding clamp and dna
Gee, L.C. , Ghaffari-Kashani, S. , Gorday, K. , Huang, Y. , Kuriyan, J. , Luo, X. , Marcus, K. , O'Donnell, M. , Subramanian, S. , Subramanian, S. , Zhang, L.
Primary Citation of Related Structures: 8UNF
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Sliding clamp | H | 228 | Tequatrovirus T4 , Synthetic Construct | MKLSKDTTALLKNFATINSGIMLKSGQFIMTRAVNGTTYAEANISDVIDFDVAIYDLNGFLGILSLVNDDAEISQSEDGNIKIADARSTIFWPAADPSTVVAPNKPIPFPVASAVTEIKAEDLQQLLRVSRGLQIDTIAITVKEGKIVINGFNKVEDSALTRVKYSLTLGDYDGENTFNFIINMANMKMQPGNYKLLLWAKGKQGAAKFEGEHANYVVALEADSTHDF |
| Sliding clamp | G | 228 | Tequatrovirus T4 , Synthetic Construct | MKLSKDTTALLKNFATINSGIMLKSGQFIMTRAVNGTTYAEANISDVIDFDVAIYDLNGFLGILSLVNDDAEISQSEDGNIKIADARSTIFWPAADPSTVVAPNKPIPFPVASAVTEIKAEDLQQLLRVSRGLQIDTIAITVKEGKIVINGFNKVEDSALTRVKYSLTLGDYDGENTFNFIINMANMKMQPGNYKLLLWAKGKQGAAKFEGEHANYVVALEADSTHDF |
| Sliding clamp | F | 228 | Tequatrovirus T4 , Synthetic Construct | MKLSKDTTALLKNFATINSGIMLKSGQFIMTRAVNGTTYAEANISDVIDFDVAIYDLNGFLGILSLVNDDAEISQSEDGNIKIADARSTIFWPAADPSTVVAPNKPIPFPVASAVTEIKAEDLQQLLRVSRGLQIDTIAITVKEGKIVINGFNKVEDSALTRVKYSLTLGDYDGENTFNFIINMANMKMQPGNYKLLLWAKGKQGAAKFEGEHANYVVALEADSTHDF |
| Sliding-clamp-loader large subunit | E | 319 | Tequatrovirus T4 , Synthetic Construct | MITVNEKEHILEQKYRPSTIDECILPAFDKETFKSITSKGKIPHIILHSPSPGTGKTTVAKALCHDVNADMMFVNGSDCKIDFVRGPLTNFASAASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAYSSNCSIIITANNIDGIIKPLQSRCRVITFGQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK |
| Sliding-clamp-loader large subunit | D | 319 | Tequatrovirus T4 , Synthetic Construct | MITVNEKEHILEQKYRPSTIDECILPAFDKETFKSITSKGKIPHIILHSPSPGTGKTTVAKALCHDVNADMMFVNGSDCKIDFVRGPLTNFASAASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAYSSNCSIIITANNIDGIIKPLQSRCRVITFGQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK |
| Sliding-clamp-loader large subunit | C | 319 | Tequatrovirus T4 , Synthetic Construct | MITVNEKEHILEQKYRPSTIDECILPAFDKETFKSITSKGKIPHIILHSPSPGTGKTTVAKALCHDVNADMMFVNGSDCKIDFVRGPLTNFASAASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAYSSNCSIIITANNIDGIIKPLQSRCRVITFGQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK |
| Sliding-clamp-loader large subunit | B | 319 | Tequatrovirus T4 , Synthetic Construct | MITVNEKEHILEQKYRPSTIDECILPAFDKETFKSITSKGKIPHIILHSPSPGTGKTTVAKALCHDVNADMMFVNGSDCKIDFVRGPLTNFASAASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAYSSNCSIIITANNIDGIIKPLQSRCRVITFGQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK |
| Sliding-clamp-loader small subunit | A | 187 | Tequatrovirus T4 , Synthetic Construct | MSLFKDDIQLNEHQVAWYSKDWTAVQSAADSFKEKAENEFFEIIGAINNKTKCSIAQKDYSKFMVENALSQFPECMPAVYAMNLIGSGLSDEAHFNYLMAAVPRGKRYGKWAKLVEDSTEVLIIKLLAKRYQVNTNDAINYKSILTKNGKLPLVLKELKGLVTDDFLKEVTKNVKEQKQLKKLALEW |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2023-10-18 Deposition Author(s): Gee, L.C. , Ghaffari-Kashani, S. , Gorday, K. , Huang, Y. , Kuriyan, J. , Luo, X. , Marcus, K. , O'Donnell, M. , Subramanian, S. , Subramanian, S. , Zhang, L.