PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8UMR

T33-ml35 assembly intermediate - designed tetrahedral protein cage using machine learning algorithms

PDB DOI: 10.2210/pdb8umr/pdb

Classification: DE NOVO PROTEIN
Organism(s): Synthetic Construct

Deposited: 2023-10-18
Deposition Author(s): Castells-Graells, R. , Meador, K. , Sawaya, M.R. , Yeates, T.O.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.42 Å

8umr
Literature

T33-ml35 assembly intermediate - designed tetrahedral protein cage using machine learning algorithms

Castells-Graells, R. , Meador, K. , Sawaya, M.R. , Yeates, T.O.

Primary Citation of Related Structures: 8UMR


Proteins
Molecule Chains Sequence Length Organism Sequence
T33-ml35-redesigned-TPR-domain-fold A 122 Synthetic Construct MNLAEKMYKAGQIEFAKGNYETAIIAYTLALLKDPNNAEAWYNLGEAYLALGNYEEAIEAYQKALELDPNNAEAWYNLGEAYLALGDYDNAIEAFTKALELDPNNKTAKAGLKLAKEKKALE
T33-ml35-redesigned-TPR-domain-fold C 122 Synthetic Construct MNLAEKMYKAGQIEFAKGNYETAIIAYTLALLKDPNNAEAWYNLGEAYLALGNYEEAIEAYQKALELDPNNAEAWYNLGEAYLALGDYDNAIEAFTKALELDPNNKTAKAGLKLAKEKKALE
T33-ml35-redesigned-TPR-domain-fold G 122 Synthetic Construct MNLAEKMYKAGQIEFAKGNYETAIIAYTLALLKDPNNAEAWYNLGEAYLALGNYEEAIEAYQKALELDPNNAEAWYNLGEAYLALGDYDNAIEAFTKALELDPNNKTAKAGLKLAKEKKALE
T33-ml35-redesigned-TPR-domain-fold I 122 Synthetic Construct MNLAEKMYKAGQIEFAKGNYETAIIAYTLALLKDPNNAEAWYNLGEAYLALGNYEEAIEAYQKALELDPNNAEAWYNLGEAYLALGDYDNAIEAFTKALELDPNNKTAKAGLKLAKEKKALE
T33-ml35-redesigned-TPR-domain-fold K 122 Synthetic Construct MNLAEKMYKAGQIEFAKGNYETAIIAYTLALLKDPNNAEAWYNLGEAYLALGNYEEAIEAYQKALELDPNNAEAWYNLGEAYLALGDYDNAIEAFTKALELDPNNKTAKAGLKLAKEKKALE
T33-ml35-redesigned-TPR-domain-fold M 122 Synthetic Construct MNLAEKMYKAGQIEFAKGNYETAIIAYTLALLKDPNNAEAWYNLGEAYLALGNYEEAIEAYQKALELDPNNAEAWYNLGEAYLALGDYDNAIEAFTKALELDPNNKTAKAGLKLAKEKKALE
T33-ml35-redesigned-TPR-domain-fold Q 122 Synthetic Construct MNLAEKMYKAGQIEFAKGNYETAIIAYTLALLKDPNNAEAWYNLGEAYLALGNYEEAIEAYQKALELDPNNAEAWYNLGEAYLALGDYDNAIEAFTKALELDPNNKTAKAGLKLAKEKKALE
T33-ml35-redesigned-TPR-domain-fold U 122 Synthetic Construct MNLAEKMYKAGQIEFAKGNYETAIIAYTLALLKDPNNAEAWYNLGEAYLALGNYEEAIEAYQKALELDPNNAEAWYNLGEAYLALGDYDNAIEAFTKALELDPNNKTAKAGLKLAKEKKALE
T33-ml35-redesigned-TPR-domain-fold W 122 Synthetic Construct MNLAEKMYKAGQIEFAKGNYETAIIAYTLALLKDPNNAEAWYNLGEAYLALGNYEEAIEAYQKALELDPNNAEAWYNLGEAYLALGDYDNAIEAFTKALELDPNNKTAKAGLKLAKEKKALE
T33-ml35-redesigned-CutA-fold B 127 Synthetic Construct MTDLSSLIETADLRLLLTTVPTETEALYLALAAVEKGLAAEVLITPVTRVRRENGKLVVEDVYRLSFKTTRERLDALVAWLQRRHPLALPECLVLTPIASSVAYRDWLRSSLQGGSHHWGGHHHHHH
T33-ml35-redesigned-CutA-fold D 127 Synthetic Construct MTDLSSLIETADLRLLLTTVPTETEALYLALAAVEKGLAAEVLITPVTRVRRENGKLVVEDVYRLSFKTTRERLDALVAWLQRRHPLALPECLVLTPIASSVAYRDWLRSSLQGGSHHWGGHHHHHH
T33-ml35-redesigned-CutA-fold F 127 Synthetic Construct MTDLSSLIETADLRLLLTTVPTETEALYLALAAVEKGLAAEVLITPVTRVRRENGKLVVEDVYRLSFKTTRERLDALVAWLQRRHPLALPECLVLTPIASSVAYRDWLRSSLQGGSHHWGGHHHHHH
T33-ml35-redesigned-CutA-fold H 127 Synthetic Construct MTDLSSLIETADLRLLLTTVPTETEALYLALAAVEKGLAAEVLITPVTRVRRENGKLVVEDVYRLSFKTTRERLDALVAWLQRRHPLALPECLVLTPIASSVAYRDWLRSSLQGGSHHWGGHHHHHH
T33-ml35-redesigned-CutA-fold J 127 Synthetic Construct MTDLSSLIETADLRLLLTTVPTETEALYLALAAVEKGLAAEVLITPVTRVRRENGKLVVEDVYRLSFKTTRERLDALVAWLQRRHPLALPECLVLTPIASSVAYRDWLRSSLQGGSHHWGGHHHHHH
T33-ml35-redesigned-CutA-fold L 127 Synthetic Construct MTDLSSLIETADLRLLLTTVPTETEALYLALAAVEKGLAAEVLITPVTRVRRENGKLVVEDVYRLSFKTTRERLDALVAWLQRRHPLALPECLVLTPIASSVAYRDWLRSSLQGGSHHWGGHHHHHH
T33-ml35-redesigned-CutA-fold N 127 Synthetic Construct MTDLSSLIETADLRLLLTTVPTETEALYLALAAVEKGLAAEVLITPVTRVRRENGKLVVEDVYRLSFKTTRERLDALVAWLQRRHPLALPECLVLTPIASSVAYRDWLRSSLQGGSHHWGGHHHHHH
T33-ml35-redesigned-CutA-fold P 127 Synthetic Construct MTDLSSLIETADLRLLLTTVPTETEALYLALAAVEKGLAAEVLITPVTRVRRENGKLVVEDVYRLSFKTTRERLDALVAWLQRRHPLALPECLVLTPIASSVAYRDWLRSSLQGGSHHWGGHHHHHH
T33-ml35-redesigned-CutA-fold R 127 Synthetic Construct MTDLSSLIETADLRLLLTTVPTETEALYLALAAVEKGLAAEVLITPVTRVRRENGKLVVEDVYRLSFKTTRERLDALVAWLQRRHPLALPECLVLTPIASSVAYRDWLRSSLQGGSHHWGGHHHHHH
T33-ml35-redesigned-CutA-fold T 127 Synthetic Construct MTDLSSLIETADLRLLLTTVPTETEALYLALAAVEKGLAAEVLITPVTRVRRENGKLVVEDVYRLSFKTTRERLDALVAWLQRRHPLALPECLVLTPIASSVAYRDWLRSSLQGGSHHWGGHHHHHH
T33-ml35-redesigned-CutA-fold V 127 Synthetic Construct MTDLSSLIETADLRLLLTTVPTETEALYLALAAVEKGLAAEVLITPVTRVRRENGKLVVEDVYRLSFKTTRERLDALVAWLQRRHPLALPECLVLTPIASSVAYRDWLRSSLQGGSHHWGGHHHHHH
T33-ml35-redesigned-CutA-fold X 127 Synthetic Construct MTDLSSLIETADLRLLLTTVPTETEALYLALAAVEKGLAAEVLITPVTRVRRENGKLVVEDVYRLSFKTTRERLDALVAWLQRRHPLALPECLVLTPIASSVAYRDWLRSSLQGGSHHWGGHHHHHH
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-10-18
Deposition Author(s): Castells-Graells, R. , Meador, K. , Sawaya, M.R. , Yeates, T.O.