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8U1D

Cryo-em structure of vaccine-elicited cd4 binding site antibody dh1285 bound to hiv-1 ch505tfchim.6r.sosip.664v4.1 env local refinement

PDB DOI: 10.2210/pdb8u1d/pdb

Classification: VIRAL PROTEIN
Organism(s): Human Immunodeficiency Virus 1 , Macaca Mulatta

Deposited: 2023-08-31
Deposition Author(s): Acharya, P. , Stalls, V.D. , Thakur, B.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.25 Å

8u1d
Literature

Cryo-em structure of vaccine-elicited cd4 binding site antibody dh1285 bound to hiv-1 ch505tfchim.6r.sosip.664v4.1 env local refinement

Acharya, P. , Stalls, V.D. , Thakur, B.

Primary Citation of Related Structures: 8U1D


Proteins
Molecule Chains Sequence Length Organism Sequence
Envelope glycoprotein gp120 A 647 Human Immunodeficiency Virus 1 , Macaca Mulatta MPMGSLQPLATLYLLGMLVASVLAAENLWVTVYYGVPVWKEAKTTLFCASDAKAYEKKVHNVWATHACVPTDPNPQEMVLKNVTENFNMWKNDMVDQMHEDVISLWDQSLKPCVKLTPLCVTLNCTNATASNSSIIEGMKNCSFNITTELRDKREKKNALFYKLDIVQLDGNSSQYRLINCNTSVITQACPKVSFDPIPIHYCAPAGYAILKCNNKTFTGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEGEIIIRSENITNNVKTIIVHLNESVKIECTRPNNKTRTSIRIGPGQWFYATGQVIGDIREAYCNINESKWNETLQRVSKKLKEYFPHKNITFQPSSGGDLEITTHSFNCGGEFFYCNTSSLFNRTYMANSTDMANSTETNSTRTITIHCRIKQIINMWQEVGRAMYAPPIAGNITCISNITGLLLTRDGGKNNTETFRPGGGNMKDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRRAVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
DH1285 Heavy Chain I 243 Human Immunodeficiency Virus 1 , Macaca Mulatta MGWSCIILFLVATATGVHAQVHLEQSGAEVKEPGSSVRLSCEASGYTFTDYYIHWVRQSPRQGLEWMGWINPYYGNTHYAEKFQGRVAMTRDRSTTTAYMDLSSLTSEDTAVYYCARDEGGSGSYSYFDSWGQGVLVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKT
DH1285 Light Chain J 233 Human Immunodeficiency Virus 1 , Macaca Mulatta MGWSCIILFLVATATGVHADIQMTQSPSSLSASVGDTVTITCRASQDINNHLSWYQQKPGRAPKALIYSASSLETGVPSRFSGSGSGTDYTLTISSLQPEDFATYYCQHYSTSPYTFGRGTKVDIKRAVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGVLKTGNSQESVTEQDSKDNTYSLSSTLTLSSTDYQSHNVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-08-31
Deposition Author(s): Acharya, P. , Stalls, V.D. , Thakur, B.