PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8TZU

Oc43 s1b domain in complex with wnb 293 and wnb 317

PDB DOI: 10.2210/pdb8tzu/pdb

Classification: VIRAL PROTEIN
Organism(s): Human Coronavirus Oc43 , Vicugna Pacos

Deposited: 2023-08-27
Deposition Author(s): Feng, J. , Pymm, P. , Tham, W.H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.9 Å

8tzu
Literature

Oc43 s1b domain in complex with wnb 293 and wnb 317

Feng, J. , Pymm, P. , Tham, W.H.

Primary Citation of Related Structures: 8TZU


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike protein S1 A 275 Human Coronavirus Oc43 , Vicugna Pacos LPNCNIEAWLNDKSVPSPLNWERKTFSNCNFNMSSLMSFIQADSFTCNNIDAAKIYGMCFSSITIDKFAIPNGRKVDLQLGNLGYLQSFNYRIDTTATSCQLYYNLPAANVSVSRFNPSTWNKRFGFIEDSVFKPRPAGVLTNHDVVYAQHCFKAPKNFCPCKLNGSCVGSGPGKNNGIGTCPAGTNYLTCDNLCTPDPITFTGTYKCPQTKSLVGIGEHCSGLAVKSDYCGGNSCTCRPQAFLGWSADSCLQGDKCNIFANFILHDVNSGLTCS
Spike protein S1 B 275 Human Coronavirus Oc43 , Vicugna Pacos LPNCNIEAWLNDKSVPSPLNWERKTFSNCNFNMSSLMSFIQADSFTCNNIDAAKIYGMCFSSITIDKFAIPNGRKVDLQLGNLGYLQSFNYRIDTTATSCQLYYNLPAANVSVSRFNPSTWNKRFGFIEDSVFKPRPAGVLTNHDVVYAQHCFKAPKNFCPCKLNGSCVGSGPGKNNGIGTCPAGTNYLTCDNLCTPDPITFTGTYKCPQTKSLVGIGEHCSGLAVKSDYCGGNSCTCRPQAFLGWSADSCLQGDKCNIFANFILHDVNSGLTCS
Spike protein S1 F 275 Human Coronavirus Oc43 , Vicugna Pacos LPNCNIEAWLNDKSVPSPLNWERKTFSNCNFNMSSLMSFIQADSFTCNNIDAAKIYGMCFSSITIDKFAIPNGRKVDLQLGNLGYLQSFNYRIDTTATSCQLYYNLPAANVSVSRFNPSTWNKRFGFIEDSVFKPRPAGVLTNHDVVYAQHCFKAPKNFCPCKLNGSCVGSGPGKNNGIGTCPAGTNYLTCDNLCTPDPITFTGTYKCPQTKSLVGIGEHCSGLAVKSDYCGGNSCTCRPQAFLGWSADSCLQGDKCNIFANFILHDVNSGLTCS
WNb 317 C 121 Human Coronavirus Oc43 , Vicugna Pacos QVQLQESGGGLVQAGGSLRLSCAASVRTFSNYAMGWFRQAPGKEREFVAAISWSGDGPYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAASYLSLNFPDDLRGQGTQVTVSSH
WNb 317 G 121 Human Coronavirus Oc43 , Vicugna Pacos QVQLQESGGGLVQAGGSLRLSCAASVRTFSNYAMGWFRQAPGKEREFVAAISWSGDGPYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAASYLSLNFPDDLRGQGTQVTVSSH
WNb 317 H 121 Human Coronavirus Oc43 , Vicugna Pacos QVQLQESGGGLVQAGGSLRLSCAASVRTFSNYAMGWFRQAPGKEREFVAAISWSGDGPYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAASYLSLNFPDDLRGQGTQVTVSSH
WNb 293 D 128 Human Coronavirus Oc43 , Vicugna Pacos QVQLQESGGGSVQAGDSLRLSCVASGRTFSSYALGWFRRAPGKEREFVAAISWSGGTTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAALWDGGSWYPEGLSDFGSWGQGTQVTVSSHH
WNb 293 E 128 Human Coronavirus Oc43 , Vicugna Pacos QVQLQESGGGSVQAGDSLRLSCVASGRTFSSYALGWFRRAPGKEREFVAAISWSGGTTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAALWDGGSWYPEGLSDFGSWGQGTQVTVSSHH
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2023-08-27
Deposition Author(s): Feng, J. , Pymm, P. , Tham, W.H.