8TQ9
Crystal structure of fab.s19.8 in complex with mhc-i (h2-dd)
PDB DOI: 10.2210/pdb8tq9/pdb
Classification: IMMUNE SYSTEM Organism(s): Mus Musculus , Synthetic Construct
Deposited: 2023-08-06 Deposition Author(s): Boyd, L.F. , Jiang, J. , Margulies, D.H. , Natarajan, K.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.9 Å
Crystal structure of fab.s19.8 in complex with mhc-i (h2-dd)
Boyd, L.F. , Jiang, J. , Margulies, D.H. , Natarajan, K.
Primary Citation of Related Structures: 8TQ9
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| H-2 class I histocompatibility antigen, D-D alpha chain | A | 273 | Mus Musculus , Synthetic Construct | SHSLRYFVTAVSRPGFGEPRYMEVGYVDNTEFVRFDSDAENPRYEPRARWIEQEGPEYWERETRRAKGNEQSFRVDLRTALRYYNQSAGGSHTLQWMAGCDVESDGRLLRGYWQFAYDGCDYIALNEDLKTWTAADMAAQITRRKWEQAGAAERDRAYLEGECVEWLRRYLKNGNATLLRTDPPKAHVTHHRRPEGDVTLRCWALGFYPADITLTWQLNGEELTQEMELVETRPAGDGTFQKWASVVVPLGKEQKYTCHVEHEGLPEPLTLRW |
| Beta-2-microglobulin | B | 101 | Mus Musculus , Synthetic Construct | YAIQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYACRVKHASMAEPKTVYWDRDM |
| Fab.S19.8 Heavy Chain | H | 218 | Mus Musculus , Synthetic Construct | VQLQQSGPVLVKPGASVKMSCKASGYTFTDHYMNWVKQSPGKSLEWIGGINPYNGGISYNQKFKGMATLTADKSSSTAYMELNSLTSEDSAVYYCVRRIGYYPSYFFDYWGQGTTLTVSSAKTTPPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIE |
| Fab.S19.8 Light Chain | L | 214 | Mus Musculus , Synthetic Construct | STTVTQSPASLSVATGEKVTIRCITSTDIDDNMNWYQQKPGEPPKLLISEGNTLRPGVPSRFSSSGFGTDFVFTIENTLSEDFADYYCLQSDDMPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC |
| Transmembrane protein gp41 | P | 10 | Mus Musculus , Synthetic Construct | RGPGRAFVTI |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2023-08-06 Deposition Author(s): Boyd, L.F. , Jiang, J. , Margulies, D.H. , Natarajan, K.