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FASTA Sequence PDB Format mmCIF Format
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8TQ8

Crystal structure of fab.34.5.8 in complex with mhc-i (h2-dd)

PDB DOI: 10.2210/pdb8tq8/pdb

Classification: IMMUNE SYSTEM
Organism(s): Mus Musculus , Synthetic Construct

Deposited: 2023-08-06
Deposition Author(s): Boyd, L.F. , Jiang, J. , Margulies, D.H. , Natarajan, K.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.69 Å

8tq8
Literature

Crystal structure of fab.34.5.8 in complex with mhc-i (h2-dd)

Boyd, L.F. , Jiang, J. , Margulies, D.H. , Natarajan, K.

Primary Citation of Related Structures: 8TQ8


Proteins
Molecule Chains Sequence Length Organism Sequence
H-2 class I histocompatibility antigen, D-D alpha chain A 273 Mus Musculus , Synthetic Construct SHSLRYFVTAVSRPGFGEPRYMEVGYVDNTEFVRFDSDAENPRYEPRARWIEQEGPEYWERETRRAKGNEQSFRVDLRTALRYYNQSAGGSHTLQWMAGCDVESDGRLLRGYWQFAYDGCDYIALNEDLKTWTAADMAAQITRRKWEQAGAAERDRAYLEGECVEWLRRYLKNGNATLLRTDPPKAHVTHHRRPEGDVTLRCWALGFYPADITLTWQLNGEELTQEMELVETRPAGDGTFQKWASVVVPLGKEQKYTCHVEHEGLPEPLTLRW
H-2 class I histocompatibility antigen, D-D alpha chain C 273 Mus Musculus , Synthetic Construct SHSLRYFVTAVSRPGFGEPRYMEVGYVDNTEFVRFDSDAENPRYEPRARWIEQEGPEYWERETRRAKGNEQSFRVDLRTALRYYNQSAGGSHTLQWMAGCDVESDGRLLRGYWQFAYDGCDYIALNEDLKTWTAADMAAQITRRKWEQAGAAERDRAYLEGECVEWLRRYLKNGNATLLRTDPPKAHVTHHRRPEGDVTLRCWALGFYPADITLTWQLNGEELTQEMELVETRPAGDGTFQKWASVVVPLGKEQKYTCHVEHEGLPEPLTLRW
Beta-2-microglobulin B 99 Mus Musculus , Synthetic Construct IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYACRVKHDSMAEPKTVYWDRDM
Beta-2-microglobulin D 99 Mus Musculus , Synthetic Construct IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYACRVKHDSMAEPKTVYWDRDM
Transmembrane protein gp41 P 10 Mus Musculus , Synthetic Construct RGPGRAFVTI
Transmembrane protein gp41 E 10 Mus Musculus , Synthetic Construct RGPGRAFVTI
Fab.34.5.8 Heavy chain H 219 Mus Musculus , Synthetic Construct SVQLEESGPELGKPGASVKMSCTASGYAFTSYVMHWVMQKPGQGLEWIGYFNPYNDGAKYNAKFKGKATLTSDKSSNTAYMELSSLTSEDSTVYYCARAYFSKGPFAYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPV
Fab.34.5.8 Heavy chain F 219 Mus Musculus , Synthetic Construct SVQLEESGPELGKPGASVKMSCTASGYAFTSYVMHWVMQKPGQGLEWIGYFNPYNDGAKYNAKFKGKATLTSDKSSNTAYMELSSLTSEDSTVYYCARAYFSKGPFAYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPV
Fab.34.5.8 Light chain L 219 Mus Musculus , Synthetic Construct LISMTQTPASLAVSLGQRATISCRASESVDRHGNSFMHWYQQKPGQPPKLLIYRASNLDSGIPARFSGSGSRTDFTLTINPVEADDVATYYCQQSNEDPPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
Fab.34.5.8 Light chain G 219 Mus Musculus , Synthetic Construct LISMTQTPASLAVSLGQRATISCRASESVDRHGNSFMHWYQQKPGQPPKLLIYRASNLDSGIPARFSGSGSRTDFTLTINPVEADDVATYYCQQSNEDPPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2023-08-06
Deposition Author(s): Boyd, L.F. , Jiang, J. , Margulies, D.H. , Natarajan, K.