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FASTA Sequence PDB Format mmCIF Format
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8TO9

Cryo-em structure of trnm-f*01 fab in complex with hiv-1 env trimer conc sosip

PDB DOI: 10.2210/pdb8to9/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Homo Sapiens , Macaca Mulatta

Deposited: 2023-08-03
Deposition Author(s): Kwong, P.D. , Morano, N.C. , Roark, R.S. , Shapiro, L.S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.03 Å

Literature

Cryo-em structure of trnm-f*01 fab in complex with hiv-1 env trimer conc sosip

Kwong, P.D. , Morano, N.C. , Roark, R.S. , Shapiro, L.S.

Primary Citation of Related Structures: 8TO9


Proteins
Molecule Chains Sequence Length Organism Sequence
Envelope glycoprotein gp120 A 463 Homo Sapiens , Macaca Mulatta NLWVTVYYGVPVWKEAKTTLFCASDAKAYEKEVHNVWATHACVPTDPNPQEMVLENVTENFNMWKNDMVDQMHEDIISLWDQSLKPCVKLTPLCVTLNCTNVNVTNTNNNNMKEEMKNCSFNTTTEIRDKKQKEYALFYRLDIVPLNENSSEYRLINCNTSTITQICPKVSFDPIPIHYCAPAGYAILKCNNKTFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSENLTDNAKTIIVHLNESVEINCTRPNNMTRKSIRIGPGQTFYALGDIIGDIRQPHCNISEAKWNKTLQRVKKKLKEHFPNKTIKFAPSSGGDLEITTHSFNCRGEFFYCNTSKLFNSTYNNTTSNSTITLPCRIKQIINMWQEVGRAMYAPPIAGNITCKSNITGLLLTRDGGNNNNNTETFRPGGGDMRDNWRSELYKYKVVEIKPLGIAPTKCKRRVVERRRRRR
Envelope glycoprotein gp120 B 463 Homo Sapiens , Macaca Mulatta NLWVTVYYGVPVWKEAKTTLFCASDAKAYEKEVHNVWATHACVPTDPNPQEMVLENVTENFNMWKNDMVDQMHEDIISLWDQSLKPCVKLTPLCVTLNCTNVNVTNTNNNNMKEEMKNCSFNTTTEIRDKKQKEYALFYRLDIVPLNENSSEYRLINCNTSTITQICPKVSFDPIPIHYCAPAGYAILKCNNKTFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSENLTDNAKTIIVHLNESVEINCTRPNNMTRKSIRIGPGQTFYALGDIIGDIRQPHCNISEAKWNKTLQRVKKKLKEHFPNKTIKFAPSSGGDLEITTHSFNCRGEFFYCNTSKLFNSTYNNTTSNSTITLPCRIKQIINMWQEVGRAMYAPPIAGNITCKSNITGLLLTRDGGNNNNNTETFRPGGGDMRDNWRSELYKYKVVEIKPLGIAPTKCKRRVVERRRRRR
Envelope glycoprotein gp120 C 463 Homo Sapiens , Macaca Mulatta NLWVTVYYGVPVWKEAKTTLFCASDAKAYEKEVHNVWATHACVPTDPNPQEMVLENVTENFNMWKNDMVDQMHEDIISLWDQSLKPCVKLTPLCVTLNCTNVNVTNTNNNNMKEEMKNCSFNTTTEIRDKKQKEYALFYRLDIVPLNENSSEYRLINCNTSTITQICPKVSFDPIPIHYCAPAGYAILKCNNKTFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSENLTDNAKTIIVHLNESVEINCTRPNNMTRKSIRIGPGQTFYALGDIIGDIRQPHCNISEAKWNKTLQRVKKKLKEHFPNKTIKFAPSSGGDLEITTHSFNCRGEFFYCNTSKLFNSTYNNTTSNSTITLPCRIKQIINMWQEVGRAMYAPPIAGNITCKSNITGLLLTRDGGNNNNNTETFRPGGGDMRDNWRSELYKYKVVEIKPLGIAPTKCKRRVVERRRRRR
TRNM-f*01 heavy chain D 126 Homo Sapiens , Macaca Mulatta QVQLQESGPGVVKPSETLSLTCAVSGDSIKSAYQYWNWIRQPRGKGPEWIGGVYSSSDSTAYNPSLESRVSISRDTSNNRFSLNLRSVTATDTATYFCARSVRDSRGWGRYFLDTWGQGLLVTVSS
TRNM-f*01 heavy chain E 126 Homo Sapiens , Macaca Mulatta QVQLQESGPGVVKPSETLSLTCAVSGDSIKSAYQYWNWIRQPRGKGPEWIGGVYSSSDSTAYNPSLESRVSISRDTSNNRFSLNLRSVTATDTATYFCARSVRDSRGWGRYFLDTWGQGLLVTVSS
TRNM-f*01 heavy chain H 126 Homo Sapiens , Macaca Mulatta QVQLQESGPGVVKPSETLSLTCAVSGDSIKSAYQYWNWIRQPRGKGPEWIGGVYSSSDSTAYNPSLESRVSISRDTSNNRFSLNLRSVTATDTATYFCARSVRDSRGWGRYFLDTWGQGLLVTVSS
TRNM-f*01 light chain F 107 Homo Sapiens , Macaca Mulatta DIQMTQSPSSLSASVGDTVTITCRASQSISTWLAWYQQKPGKAPKVLIYSASILQSGVPSRFRGSGSGSDFTLTIGSLQIEDFATYFCQQYTGSPFTFGGGTKVEIK
TRNM-f*01 light chain G 107 Homo Sapiens , Macaca Mulatta DIQMTQSPSSLSASVGDTVTITCRASQSISTWLAWYQQKPGKAPKVLIYSASILQSGVPSRFRGSGSGSDFTLTIGSLQIEDFATYFCQQYTGSPFTFGGGTKVEIK
TRNM-f*01 light chain L 107 Homo Sapiens , Macaca Mulatta DIQMTQSPSSLSASVGDTVTITCRASQSISTWLAWYQQKPGKAPKVLIYSASILQSGVPSRFRGSGSGSDFTLTIGSLQIEDFATYFCQQYTGSPFTFGGGTKVEIK
Envelope glycoprotein gp41 I 153 Homo Sapiens , Macaca Mulatta AVGLGAVFLGFLGAAGSTMGAASNTLTVQARQLLSGIVQQQSNLLRAPEAQQHMLQLGVWGFKQLQARVLAIERYLEVQQLLGIWGCSGKLICCTAVPWNSSWSNKSQEDIWDNMTWMQWDREIGNYTDTIYRLLEESQFQQEINEKDLLALD
Envelope glycoprotein gp41 J 153 Homo Sapiens , Macaca Mulatta AVGLGAVFLGFLGAAGSTMGAASNTLTVQARQLLSGIVQQQSNLLRAPEAQQHMLQLGVWGFKQLQARVLAIERYLEVQQLLGIWGCSGKLICCTAVPWNSSWSNKSQEDIWDNMTWMQWDREIGNYTDTIYRLLEESQFQQEINEKDLLALD
Envelope glycoprotein gp41 Z 153 Homo Sapiens , Macaca Mulatta AVGLGAVFLGFLGAAGSTMGAASNTLTVQARQLLSGIVQQQSNLLRAPEAQQHMLQLGVWGFKQLQARVLAIERYLEVQQLLGIWGCSGKLICCTAVPWNSSWSNKSQEDIWDNMTWMQWDREIGNYTDTIYRLLEESQFQQEINEKDLLALD
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-08-03
Deposition Author(s): Kwong, P.D. , Morano, N.C. , Roark, R.S. , Shapiro, L.S.