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FASTA Sequence PDB Format mmCIF Format
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8TNU

Cryo-em structure of trnm-b*01 fab in complex with hiv-1 env trimer bg505.ds sosip

PDB DOI: 10.2210/pdb8tnu/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Human Immunodeficiency Virus 1 , Macaca Mulatta

Deposited: 2023-08-02
Deposition Author(s): Kwong, P.D. , Morano, N.C. , Roark, R.S. , Shapiro, L.S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.36 Å

8tnu
Literature

Cryo-em structure of trnm-b*01 fab in complex with hiv-1 env trimer bg505.ds sosip

Kwong, P.D. , Morano, N.C. , Roark, R.S. , Shapiro, L.S.

Primary Citation of Related Structures: 8TNU


Proteins
Molecule Chains Sequence Length Organism Sequence
TRNM-b*01 heavy chain B 226 Human Immunodeficiency Virus 1 , Macaca Mulatta VQLQESGPGVVKPSETLSLTCEVSLHASRVGSYYWSWIRQSQGQRPEWMGGLYSDTGNTDYNPSLKSRVSLSRDMSKKQFFLNLRSVTATDTAVYFCVSRYVDHWTNRRFDVWGPGAQVTVTSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTC
TRNM-b*01 heavy chain J 226 Human Immunodeficiency Virus 1 , Macaca Mulatta VQLQESGPGVVKPSETLSLTCEVSLHASRVGSYYWSWIRQSQGQRPEWMGGLYSDTGNTDYNPSLKSRVSLSRDMSKKQFFLNLRSVTATDTAVYFCVSRYVDHWTNRRFDVWGPGAQVTVTSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTC
TRNM-b*01 heavy chain H 226 Human Immunodeficiency Virus 1 , Macaca Mulatta VQLQESGPGVVKPSETLSLTCEVSLHASRVGSYYWSWIRQSQGQRPEWMGGLYSDTGNTDYNPSLKSRVSLSRDMSKKQFFLNLRSVTATDTAVYFCVSRYVDHWTNRRFDVWGPGAQVTVTSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTC
TRNM-b*01 light chain C 213 Human Immunodeficiency Virus 1 , Macaca Mulatta DIQMTQSPSSLSASVGDRVTVTCRASLDINKDLNWYQQKPGKAPALLIYAASTLQTGVSSRFSGSGSGTQFTLTISSLQPEDFATYYCLQDYSFPLTFGGGTKIDLKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRAA
TRNM-b*01 light chain K 213 Human Immunodeficiency Virus 1 , Macaca Mulatta DIQMTQSPSSLSASVGDRVTVTCRASLDINKDLNWYQQKPGKAPALLIYAASTLQTGVSSRFSGSGSGTQFTLTISSLQPEDFATYYCLQDYSFPLTFGGGTKIDLKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRAA
TRNM-b*01 light chain L 213 Human Immunodeficiency Virus 1 , Macaca Mulatta DIQMTQSPSSLSASVGDRVTVTCRASLDINKDLNWYQQKPGKAPALLIYAASTLQTGVSSRFSGSGSGTQFTLTISSLQPEDFATYYCLQDYSFPLTFGGGTKIDLKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRAA
Transmembrane protein gp41 Z 153 Human Immunodeficiency Virus 1 , Macaca Mulatta AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Transmembrane protein gp41 X 153 Human Immunodeficiency Virus 1 , Macaca Mulatta AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Transmembrane protein gp41 Y 153 Human Immunodeficiency Virus 1 , Macaca Mulatta AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
BG505 DS-SOSIP Surface protein gp120 G 481 Human Immunodeficiency Virus 1 , Macaca Mulatta AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSACTQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQCMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
BG505 DS-SOSIP Surface protein gp120 E 481 Human Immunodeficiency Virus 1 , Macaca Mulatta AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSACTQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQCMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
BG505 DS-SOSIP Surface protein gp120 F 481 Human Immunodeficiency Virus 1 , Macaca Mulatta AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSACTQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQCMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-08-02
Deposition Author(s): Kwong, P.D. , Morano, N.C. , Roark, R.S. , Shapiro, L.S.