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8TIZ

Isoreticular, interpenetrating co-crystal of replication initiator protein repe54 and symmetrical expanded duplex (31mer) containing the cognate repe54 sequence and an additional g-c rich sequence with 2 sticky base overhangs and no terminal phosphates and crosslinked with edc.

PDB DOI: 10.2210/pdb8tiz/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Escherichia Coli K-12 , Synthetic Construct

Deposited: 2023-07-20
Deposition Author(s): Orun, A.R. , Shields, E.T. , Shrestha, R. , Slaughter, C.K. , Snow, C.D.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.11 Å

8tiz
Literature

Isoreticular, interpenetrating co-crystal of replication initiator protein repe54 and symmetrical expanded duplex (31mer) containing the cognate repe54 sequence and an additional g-c rich sequence with 2 sticky base overhangs and no terminal phosphates and crosslinked with edc.

Orun, A.R. , Shields, E.T. , Shrestha, R. , Slaughter, C.K. , Snow, C.D.

Primary Citation of Related Structures: 8TIZ


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(CP*CP*CP*GP*GP*AP*CP*CP*TP*GP*TP*GP*AP*CP*AP*AP*AP*TP*TP*GP*CP*CP*CP*TP*CP*AP*GP*AP*CP*GP*G)-3')| a 31 NA CCCGGACCTGTGACAAATTGCCCTCAGACGG
DNA (5'-D(GP*GP*CP*CP*GP*TP*CP*TP*GP*AP*GP*GP*GP*CP*AP*AP*TP*TP*TP*GP*TP*CP*AP*CP*AP*GP*GP*TP*CP*CP*GP)-3') b 31 NA GGCCGTCTGAGGGCAATTTGTCACAGGTCCG

Proteins
Molecule Chains Sequence Length Organism Sequence
Replication initiation protein C 263 Escherichia Coli K-12 , Synthetic Construct MRGSHHHHHHGSMAETAVINHKKRKNSPRIVQSNDLTEAAYSLSRDQKRMLYLFVDQIRKSDGTLQEHDGICEIHVAKYAEIFGLTSAEASKDIRQALKSFAGKEVVFYRPEEDAGDEKGYESFPWFIKPAHSPSRGLYSVHINPYLIPFFIGLQNRFTQFRLSETKEITNPYAMRLYESLCQYRKPDGSGIVSLKIDWIIERYQLPQSYQRMPDFRRRFLQVCVNEINSRTPMRLSYIEKKKGRQTTHIVFSFRDITSMTTG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2023-07-20
Deposition Author(s): Orun, A.R. , Shields, E.T. , Shrestha, R. , Slaughter, C.K. , Snow, C.D.