PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8T3Y

Structure of bre1-nucleosome complex - state1

PDB DOI: 10.2210/pdb8t3y/pdb

Classification: DNA BINDING PROTEIN/Transferase/DNA
Organism(s): Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Synthetic Construct , Xenopus Laevis

Deposited: 2023-06-08
Deposition Author(s): Hicks, C.W. , Wolberger, C. , Zhao, F.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.47 Å

8t3y
Literature

Structure of bre1-nucleosome complex - state1

Hicks, C.W. , Wolberger, C. , Zhao, F.

Primary Citation of Related Structures: 8T3Y


Proteins
Molecule Chains Sequence Length Organism Sequence
Histone H3.2 A 135 Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Synthetic Construct , Xenopus Laevis ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H3.2 E 135 Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Synthetic Construct , Xenopus Laevis ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H4 B 102 Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Synthetic Construct , Xenopus Laevis SGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H4 F 102 Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Synthetic Construct , Xenopus Laevis SGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H2A type 1 C 129 Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Synthetic Construct , Xenopus Laevis SGRGKQGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKKTESSKSAKSK
Histone H2A type 1 G 129 Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Synthetic Construct , Xenopus Laevis SGRGKQGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKKTESSKSAKSK
Histone H2B D 122 Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Synthetic Construct , Xenopus Laevis AKSAPAPKKGSKKAVTKTQKKDGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Histone H2B H 122 Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Synthetic Construct , Xenopus Laevis AKSAPAPKKGSKKAVTKTQKKDGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
E3 ubiquitin-protein ligase BRE1 K 110 Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Synthetic Construct , Xenopus Laevis KLNDTEIELKHFKQKASHLESKCEKLHDTLFRGNNKNKGSSDEALVEELANFRTLVYCSLCSKNWKNMAIKTCGHVFCENCCKERLAARMRKCPTCNKAFSSNDLLTVHL
E3 ubiquitin-protein ligase BRE1 L 110 Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Synthetic Construct , Xenopus Laevis KLNDTEIELKHFKQKASHLESKCEKLHDTLFRGNNKNKGSSDEALVEELANFRTLVYCSLCSKNWKNMAIKTCGHVFCENCCKERLAARMRKCPTCNKAFSSNDLLTVHL

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
601 DNA Strand 1 i 146 NA TCGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCCCCGCGTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATCCGAT
601 DNA Strand 2 j 146 NA ATCGGATGTATATATCTGACACGTGCCTGGAGACTAGGGAGTAATCCCCTTGGCGGTTAAAACGCGGGGGACAGCGCGTACGTGCGTTTAAGCGGTGCTAGAGCTGTCTACGACCAATTGAGCGGCCTCGGCACCGGGATTCTCGA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-06-08
Deposition Author(s): Hicks, C.W. , Wolberger, C. , Zhao, F.