The crystal structure of hemagglutinin form a h7n9 influenza virus (a/shanghai/1/2013) in complex with antibody 1e11
PDB DOI: 10.2210/pdb8t1g/pdb
Classification: IMMUNE SYSTEM/VIRAL PROTEIN Organism(s): Homo Sapiens , Influenza A Virus
Deposited: 2023-06-02 Deposition Author(s): Kwong, P.D. , Zhou, T.
The crystal structure of hemagglutinin form a h7n9 influenza virus (a/shanghai/1/2013) in complex with antibody 1e11
Primary Citation of Related Structures: 8T1G
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Hemagglutinin HA1 | A | 321 | Homo Sapiens , Influenza A Virus | DKICLGHHAVSNGTKVNTLTERGVEVVNATETVERTNIPRICSKGKRTVDLGQCGLLGTITGPPQCDQFLEFSADLIIERREGSDVCYPGKFVNEEALRQILRESGGIDKEAMGFTYSGIRTNGATSACRRSGSSFYAEMKWLLSNTDNAAFPQMTKSYKNTRKSPALIVWGIHHSVSTAEQTKLYGSGNKLVTVGSSNYQQSFVPSPGARPQVNGLSGRIDFHWLMLNPNDTVTFSFNGAFIAPDRASFLRGKSMGIQSGVQVDANCEGDCYHSGGTIISNLPFQNIDSRAVGKCPRYVKQRSLLLATGMKNVPEIPKGR |
Hemagglutinin HA1 | C | 321 | Homo Sapiens , Influenza A Virus | DKICLGHHAVSNGTKVNTLTERGVEVVNATETVERTNIPRICSKGKRTVDLGQCGLLGTITGPPQCDQFLEFSADLIIERREGSDVCYPGKFVNEEALRQILRESGGIDKEAMGFTYSGIRTNGATSACRRSGSSFYAEMKWLLSNTDNAAFPQMTKSYKNTRKSPALIVWGIHHSVSTAEQTKLYGSGNKLVTVGSSNYQQSFVPSPGARPQVNGLSGRIDFHWLMLNPNDTVTFSFNGAFIAPDRASFLRGKSMGIQSGVQVDANCEGDCYHSGGTIISNLPFQNIDSRAVGKCPRYVKQRSLLLATGMKNVPEIPKGR |
Hemagglutinin HA1 | E | 321 | Homo Sapiens , Influenza A Virus | DKICLGHHAVSNGTKVNTLTERGVEVVNATETVERTNIPRICSKGKRTVDLGQCGLLGTITGPPQCDQFLEFSADLIIERREGSDVCYPGKFVNEEALRQILRESGGIDKEAMGFTYSGIRTNGATSACRRSGSSFYAEMKWLLSNTDNAAFPQMTKSYKNTRKSPALIVWGIHHSVSTAEQTKLYGSGNKLVTVGSSNYQQSFVPSPGARPQVNGLSGRIDFHWLMLNPNDTVTFSFNGAFIAPDRASFLRGKSMGIQSGVQVDANCEGDCYHSGGTIISNLPFQNIDSRAVGKCPRYVKQRSLLLATGMKNVPEIPKGR |
Hemagglutinin HA2 | B | 210 | Homo Sapiens , Influenza A Virus | GLFGAIAGFIENGWEGLIDGWYGFRHQNAQGEGTAADYKSTQSAIDQITGKLNRLIEKTNQQFELIDNEFNEVEKQIGNVINWTRDSITEVWSYNAELLVAMENQHTIDLADSEMDKLYERVKRQLRENAEEDGTGCFEIFHKCDDDCMASIRNNTYDHSKYREEAMQNRIQIDGSGYIPEAPRDGQAYVRKDGEWVLLSTFLSGRLVPR |
Hemagglutinin HA2 | D | 210 | Homo Sapiens , Influenza A Virus | GLFGAIAGFIENGWEGLIDGWYGFRHQNAQGEGTAADYKSTQSAIDQITGKLNRLIEKTNQQFELIDNEFNEVEKQIGNVINWTRDSITEVWSYNAELLVAMENQHTIDLADSEMDKLYERVKRQLRENAEEDGTGCFEIFHKCDDDCMASIRNNTYDHSKYREEAMQNRIQIDGSGYIPEAPRDGQAYVRKDGEWVLLSTFLSGRLVPR |
Hemagglutinin HA2 | F | 210 | Homo Sapiens , Influenza A Virus | GLFGAIAGFIENGWEGLIDGWYGFRHQNAQGEGTAADYKSTQSAIDQITGKLNRLIEKTNQQFELIDNEFNEVEKQIGNVINWTRDSITEVWSYNAELLVAMENQHTIDLADSEMDKLYERVKRQLRENAEEDGTGCFEIFHKCDDDCMASIRNNTYDHSKYREEAMQNRIQIDGSGYIPEAPRDGQAYVRKDGEWVLLSTFLSGRLVPR |
1E11 Fab Heavy chain | G | 232 | Homo Sapiens , Influenza A Virus | QVQLQESGPGLVKPSETLSLTCTVSGASVSSYFWSWIRQPAGKALEWIGRIYTSGNTKSNPSLESRVTMSLDASKDQFSLKLTSVTAADTAVYYCAAGRLDYSDTTGYYKPPPLDYWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK |
1E11 Fab Heavy chain | H | 232 | Homo Sapiens , Influenza A Virus | QVQLQESGPGLVKPSETLSLTCTVSGASVSSYFWSWIRQPAGKALEWIGRIYTSGNTKSNPSLESRVTMSLDASKDQFSLKLTSVTAADTAVYYCAAGRLDYSDTTGYYKPPPLDYWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK |
1E11 Fab Heavy chain | J | 232 | Homo Sapiens , Influenza A Virus | QVQLQESGPGLVKPSETLSLTCTVSGASVSSYFWSWIRQPAGKALEWIGRIYTSGNTKSNPSLESRVTMSLDASKDQFSLKLTSVTAADTAVYYCAAGRLDYSDTTGYYKPPPLDYWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK |
1E11 Fab Light chain | I | 219 | Homo Sapiens , Influenza A Virus | DVVMTQSPLSLPVTLGQPASISCRSSQGLAFLDGNTYLSWFQQRPGQSPRRLIYKVSNRDSGVPDRFSGSGSRTDFTLKISRVEAEDVGVYYCMQGTHWPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC |
1E11 Fab Light chain | K | 219 | Homo Sapiens , Influenza A Virus | DVVMTQSPLSLPVTLGQPASISCRSSQGLAFLDGNTYLSWFQQRPGQSPRRLIYKVSNRDSGVPDRFSGSGSRTDFTLKISRVEAEDVGVYYCMQGTHWPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC |
1E11 Fab Light chain | L | 219 | Homo Sapiens , Influenza A Virus | DVVMTQSPLSLPVTLGQPASISCRSSQGLAFLDGNTYLSWFQQRPGQSPRRLIYKVSNRDSGVPDRFSGSGSRTDFTLKISRVEAEDVGVYYCMQGTHWPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC |
Method: X-RAY DIFFRACTION
Deposited Date: 2023-06-02 Deposition Author(s): Kwong, P.D. , Zhou, T.