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FASTA Sequence PDB Format mmCIF Format
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8SZZ

Cryoem structure of computationally designed nanocage o32-zl4

PDB DOI: 10.2210/pdb8szz/pdb

Classification: DE NOVO PROTEIN
Organism(s): Panax Ginseng , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2023-05-30
Deposition Author(s): Borst, A. , Weidle, C.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.9 Å

Literature

Cryoem structure of computationally designed nanocage o32-zl4

Borst, A. , Weidle, C.

Primary Citation of Related Structures: 8SZZ


Proteins
Molecule Chains Sequence Length Organism Sequence
O32-ZL4 Component A 0 76 Panax Ginseng , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MTDELLRLAKEQAELLKEIKILVELIAMLVKVIQKDPSDEALKALAELVRKLKELVEDMERSMKEQLYIIKGSWSG
O32-ZL4 Component A 1 76 Panax Ginseng , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MTDELLRLAKEQAELLKEIKILVELIAMLVKVIQKDPSDEALKALAELVRKLKELVEDMERSMKEQLYIIKGSWSG
O32-ZL4 Component A 2 76 Panax Ginseng , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MTDELLRLAKEQAELLKEIKILVELIAMLVKVIQKDPSDEALKALAELVRKLKELVEDMERSMKEQLYIIKGSWSG
O32-ZL4 Component A 3 76 Panax Ginseng , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MTDELLRLAKEQAELLKEIKILVELIAMLVKVIQKDPSDEALKALAELVRKLKELVEDMERSMKEQLYIIKGSWSG
O32-ZL4 Component A P 76 Panax Ginseng , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MTDELLRLAKEQAELLKEIKILVELIAMLVKVIQKDPSDEALKALAELVRKLKELVEDMERSMKEQLYIIKGSWSG
O32-ZL4 Component A Q 76 Panax Ginseng , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MTDELLRLAKEQAELLKEIKILVELIAMLVKVIQKDPSDEALKALAELVRKLKELVEDMERSMKEQLYIIKGSWSG
O32-ZL4 Component A R 76 Panax Ginseng , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MTDELLRLAKEQAELLKEIKILVELIAMLVKVIQKDPSDEALKALAELVRKLKELVEDMERSMKEQLYIIKGSWSG
O32-ZL4 Component A S 76 Panax Ginseng , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MTDELLRLAKEQAELLKEIKILVELIAMLVKVIQKDPSDEALKALAELVRKLKELVEDMERSMKEQLYIIKGSWSG
O32-ZL4 Component A T 76 Panax Ginseng , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MTDELLRLAKEQAELLKEIKILVELIAMLVKVIQKDPSDEALKALAELVRKLKELVEDMERSMKEQLYIIKGSWSG
O32-ZL4 Component A V 76 Panax Ginseng , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MTDELLRLAKEQAELLKEIKILVELIAMLVKVIQKDPSDEALKALAELVRKLKELVEDMERSMKEQLYIIKGSWSG
O32-ZL4 Component A W 76 Panax Ginseng , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MTDELLRLAKEQAELLKEIKILVELIAMLVKVIQKDPSDEALKALAELVRKLKELVEDMERSMKEQLYIIKGSWSG
O32-ZL4 Component A X 76 Panax Ginseng , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MTDELLRLAKEQAELLKEIKILVELIAMLVKVIQKDPSDEALKALAELVRKLKELVEDMERSMKEQLYIIKGSWSG
O32-ZL4 Component B O 213 Panax Ginseng , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MKMEELFKKHKIVAVLRANDAQEAREKALAVFEGGVHLIEITFTVPNAAAVILLLSFLKEKGAIIGAGTVTSEEQCALAVLSGAEFIVSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKAMKGPFPNVKFVPTGGVNLDNVCEWFKAGVLAVGVGSALVKGTPDEVREKAKAFVEKIRGCTELEHHHHHH
O32-ZL4 Component B U 213 Panax Ginseng , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MKMEELFKKHKIVAVLRANDAQEAREKALAVFEGGVHLIEITFTVPNAAAVILLLSFLKEKGAIIGAGTVTSEEQCALAVLSGAEFIVSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKAMKGPFPNVKFVPTGGVNLDNVCEWFKAGVLAVGVGSALVKGTPDEVREKAKAFVEKIRGCTELEHHHHHH
O32-ZL4 Component B Y 213 Panax Ginseng , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MKMEELFKKHKIVAVLRANDAQEAREKALAVFEGGVHLIEITFTVPNAAAVILLLSFLKEKGAIIGAGTVTSEEQCALAVLSGAEFIVSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKAMKGPFPNVKFVPTGGVNLDNVCEWFKAGVLAVGVGSALVKGTPDEVREKAKAFVEKIRGCTELEHHHHHH
O32-ZL4 Component B Z 213 Panax Ginseng , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MKMEELFKKHKIVAVLRANDAQEAREKALAVFEGGVHLIEITFTVPNAAAVILLLSFLKEKGAIIGAGTVTSEEQCALAVLSGAEFIVSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKAMKGPFPNVKFVPTGGVNLDNVCEWFKAGVLAVGVGSALVKGTPDEVREKAKAFVEKIRGCTELEHHHHHH
O32-ZL4 Component B I 213 Panax Ginseng , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MKMEELFKKHKIVAVLRANDAQEAREKALAVFEGGVHLIEITFTVPNAAAVILLLSFLKEKGAIIGAGTVTSEEQCALAVLSGAEFIVSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKAMKGPFPNVKFVPTGGVNLDNVCEWFKAGVLAVGVGSALVKGTPDEVREKAKAFVEKIRGCTELEHHHHHH
O32-ZL4 Component B J 213 Panax Ginseng , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MKMEELFKKHKIVAVLRANDAQEAREKALAVFEGGVHLIEITFTVPNAAAVILLLSFLKEKGAIIGAGTVTSEEQCALAVLSGAEFIVSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKAMKGPFPNVKFVPTGGVNLDNVCEWFKAGVLAVGVGSALVKGTPDEVREKAKAFVEKIRGCTELEHHHHHH
O32-ZL4 Component B K 213 Panax Ginseng , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MKMEELFKKHKIVAVLRANDAQEAREKALAVFEGGVHLIEITFTVPNAAAVILLLSFLKEKGAIIGAGTVTSEEQCALAVLSGAEFIVSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKAMKGPFPNVKFVPTGGVNLDNVCEWFKAGVLAVGVGSALVKGTPDEVREKAKAFVEKIRGCTELEHHHHHH
O32-ZL4 Component B L 213 Panax Ginseng , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MKMEELFKKHKIVAVLRANDAQEAREKALAVFEGGVHLIEITFTVPNAAAVILLLSFLKEKGAIIGAGTVTSEEQCALAVLSGAEFIVSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKAMKGPFPNVKFVPTGGVNLDNVCEWFKAGVLAVGVGSALVKGTPDEVREKAKAFVEKIRGCTELEHHHHHH
O32-ZL4 Component B M 213 Panax Ginseng , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MKMEELFKKHKIVAVLRANDAQEAREKALAVFEGGVHLIEITFTVPNAAAVILLLSFLKEKGAIIGAGTVTSEEQCALAVLSGAEFIVSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKAMKGPFPNVKFVPTGGVNLDNVCEWFKAGVLAVGVGSALVKGTPDEVREKAKAFVEKIRGCTELEHHHHHH
O32-ZL4 Component B N 213 Panax Ginseng , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MKMEELFKKHKIVAVLRANDAQEAREKALAVFEGGVHLIEITFTVPNAAAVILLLSFLKEKGAIIGAGTVTSEEQCALAVLSGAEFIVSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKAMKGPFPNVKFVPTGGVNLDNVCEWFKAGVLAVGVGSALVKGTPDEVREKAKAFVEKIRGCTELEHHHHHH
O32-ZL4 Component B A 213 Panax Ginseng , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MKMEELFKKHKIVAVLRANDAQEAREKALAVFEGGVHLIEITFTVPNAAAVILLLSFLKEKGAIIGAGTVTSEEQCALAVLSGAEFIVSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKAMKGPFPNVKFVPTGGVNLDNVCEWFKAGVLAVGVGSALVKGTPDEVREKAKAFVEKIRGCTELEHHHHHH
O32-ZL4 Component B B 213 Panax Ginseng , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MKMEELFKKHKIVAVLRANDAQEAREKALAVFEGGVHLIEITFTVPNAAAVILLLSFLKEKGAIIGAGTVTSEEQCALAVLSGAEFIVSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKAMKGPFPNVKFVPTGGVNLDNVCEWFKAGVLAVGVGSALVKGTPDEVREKAKAFVEKIRGCTELEHHHHHH
O32-ZL4 Component B C 213 Panax Ginseng , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MKMEELFKKHKIVAVLRANDAQEAREKALAVFEGGVHLIEITFTVPNAAAVILLLSFLKEKGAIIGAGTVTSEEQCALAVLSGAEFIVSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKAMKGPFPNVKFVPTGGVNLDNVCEWFKAGVLAVGVGSALVKGTPDEVREKAKAFVEKIRGCTELEHHHHHH
O32-ZL4 Component B D 213 Panax Ginseng , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MKMEELFKKHKIVAVLRANDAQEAREKALAVFEGGVHLIEITFTVPNAAAVILLLSFLKEKGAIIGAGTVTSEEQCALAVLSGAEFIVSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKAMKGPFPNVKFVPTGGVNLDNVCEWFKAGVLAVGVGSALVKGTPDEVREKAKAFVEKIRGCTELEHHHHHH
O32-ZL4 Component B E 213 Panax Ginseng , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MKMEELFKKHKIVAVLRANDAQEAREKALAVFEGGVHLIEITFTVPNAAAVILLLSFLKEKGAIIGAGTVTSEEQCALAVLSGAEFIVSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKAMKGPFPNVKFVPTGGVNLDNVCEWFKAGVLAVGVGSALVKGTPDEVREKAKAFVEKIRGCTELEHHHHHH
O32-ZL4 Component B F 213 Panax Ginseng , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MKMEELFKKHKIVAVLRANDAQEAREKALAVFEGGVHLIEITFTVPNAAAVILLLSFLKEKGAIIGAGTVTSEEQCALAVLSGAEFIVSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKAMKGPFPNVKFVPTGGVNLDNVCEWFKAGVLAVGVGSALVKGTPDEVREKAKAFVEKIRGCTELEHHHHHH
O32-ZL4 Component B G 213 Panax Ginseng , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MKMEELFKKHKIVAVLRANDAQEAREKALAVFEGGVHLIEITFTVPNAAAVILLLSFLKEKGAIIGAGTVTSEEQCALAVLSGAEFIVSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKAMKGPFPNVKFVPTGGVNLDNVCEWFKAGVLAVGVGSALVKGTPDEVREKAKAFVEKIRGCTELEHHHHHH
O32-ZL4 Component B H 213 Panax Ginseng , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MKMEELFKKHKIVAVLRANDAQEAREKALAVFEGGVHLIEITFTVPNAAAVILLLSFLKEKGAIIGAGTVTSEEQCALAVLSGAEFIVSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKAMKGPFPNVKFVPTGGVNLDNVCEWFKAGVLAVGVGSALVKGTPDEVREKAKAFVEKIRGCTELEHHHHHH
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-05-30
Deposition Author(s): Borst, A. , Weidle, C.