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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8SW4

Bg505 gt1.1 sosip in complex with nhp fabs 21n13, 21m20 and rm20a3

PDB DOI: 10.2210/pdb8sw4/pdb

Classification: VIRAL PROTEIN
Organism(s): Human Immunodeficiency Virus 1 , Macaca

Deposited: 2023-05-17
Deposition Author(s): Ozorowski, G. , Torres, J.L. , Ward, A.B. , Zhang, S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.85 Å

8sw4
Literature

Bg505 gt1.1 sosip in complex with nhp fabs 21n13, 21m20 and rm20a3

Ozorowski, G. , Torres, J.L. , Ward, A.B. , Zhang, S.

Primary Citation of Related Structures: 8SW4


Proteins
Molecule Chains Sequence Length Organism Sequence
21M20 heavy chain variable region H 125 Human Immunodeficiency Virus 1 , Macaca EVQLVESGGGLAKPGGSLRLSCAASGFTFSRSIMHWVRQAPGKGLEWVSTINYAGSTYYADSVRGRFVISRDNSKNTLSLQMNSVRPEDRAVYHCAKDKEGYYSGGYPLWYFDLWGPGTPVTISS
21M20 light chain variable region L 107 Human Immunodeficiency Virus 1 , Macaca DVQMTQSPSSLSASVGDKVSITCRASQGIADALAWYQQKPGKAPKLLIYGASNLESGVPSRFSGSGSGTDFSLTISSLQAEDFAVYYCQQRNSHPPTFGQGTRVEVK
BG505 GT1.1 SOSIP gp120 A 509 Human Immunodeficiency Virus 1 , Macaca MDAMKRGLCCVLLLCGAVFVSPSQEIHARFRRGARAENLWVTVYYGVPVWKDAETTLFCASDAKAYETKKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKRQKVHALFYKLDIVPINENQNTSYRLINCNTAAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSKDIRNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQWFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCDTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTDSTTETFRPSGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
BG505 GT1.1 SOSIP gp120 C 509 Human Immunodeficiency Virus 1 , Macaca MDAMKRGLCCVLLLCGAVFVSPSQEIHARFRRGARAENLWVTVYYGVPVWKDAETTLFCASDAKAYETKKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKRQKVHALFYKLDIVPINENQNTSYRLINCNTAAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSKDIRNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQWFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCDTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTDSTTETFRPSGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
BG505 GT1.1 SOSIP gp120 D 509 Human Immunodeficiency Virus 1 , Macaca MDAMKRGLCCVLLLCGAVFVSPSQEIHARFRRGARAENLWVTVYYGVPVWKDAETTLFCASDAKAYETKKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKRQKVHALFYKLDIVPINENQNTSYRLINCNTAAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSKDIRNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQWFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCDTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTDSTTETFRPSGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
Envelope glycoprotein gp41 B 153 Human Immunodeficiency Virus 1 , Macaca AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Envelope glycoprotein gp41 G 153 Human Immunodeficiency Virus 1 , Macaca AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Envelope glycoprotein gp41 I 153 Human Immunodeficiency Virus 1 , Macaca AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
RM20A3 heavy chain variable region E 124 Human Immunodeficiency Virus 1 , Macaca EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTVS
RM20A3 heavy chain variable region J 124 Human Immunodeficiency Virus 1 , Macaca EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTVS
RM20A3 heavy chain variable region K 124 Human Immunodeficiency Virus 1 , Macaca EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTVS
RM20A3 light chain variable region F 111 Human Immunodeficiency Virus 1 , Macaca QSALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTVL
RM20A3 light chain variable region M 111 Human Immunodeficiency Virus 1 , Macaca QSALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTVL
RM20A3 light chain variable region N 111 Human Immunodeficiency Virus 1 , Macaca QSALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTVL
21N13 heavy chain variable region O 130 Human Immunodeficiency Virus 1 , Macaca QVQLQESGPGRVKPSETLSLTCAVSDDSFGSSYFYWSWIRQAPGKGLEWIGYIAYSGGVRYNPSLSSRVTISRNIHERQFYLRLTSMTAADTAVYYCARHCEDDYGYYSAAQSYGLDSWGQGIAVTVSPS
21N13 heavy chain variable region Q 130 Human Immunodeficiency Virus 1 , Macaca QVQLQESGPGRVKPSETLSLTCAVSDDSFGSSYFYWSWIRQAPGKGLEWIGYIAYSGGVRYNPSLSSRVTISRNIHERQFYLRLTSMTAADTAVYYCARHCEDDYGYYSAAQSYGLDSWGQGIAVTVSPS
21N13 heavy chain variable region S 130 Human Immunodeficiency Virus 1 , Macaca QVQLQESGPGRVKPSETLSLTCAVSDDSFGSSYFYWSWIRQAPGKGLEWIGYIAYSGGVRYNPSLSSRVTISRNIHERQFYLRLTSMTAADTAVYYCARHCEDDYGYYSAAQSYGLDSWGQGIAVTVSPS
21N13 light chain variable region P 107 Human Immunodeficiency Virus 1 , Macaca DIQMTQSPSSLSASVGDRVTITCRTSENVNNCLNWYQQKPGKAPKLLIYRTSTLQRGVPSRFSGTGSGTDYTLTISSLQSEDFGTYYCQHYYGTPLTFGGGTMVDIK
21N13 light chain variable region R 107 Human Immunodeficiency Virus 1 , Macaca DIQMTQSPSSLSASVGDRVTITCRTSENVNNCLNWYQQKPGKAPKLLIYRTSTLQRGVPSRFSGTGSGTDYTLTISSLQSEDFGTYYCQHYYGTPLTFGGGTMVDIK
21N13 light chain variable region T 107 Human Immunodeficiency Virus 1 , Macaca DIQMTQSPSSLSASVGDRVTITCRTSENVNNCLNWYQQKPGKAPKLLIYRTSTLQRGVPSRFSGTGSGTDYTLTISSLQSEDFGTYYCQHYYGTPLTFGGGTMVDIK
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-05-17
Deposition Author(s): Ozorowski, G. , Torres, J.L. , Ward, A.B. , Zhang, S.