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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8SW3

Bg505 gt1.1 sosip in complex with nhp fabs 12c11 and rm20a3

PDB DOI: 10.2210/pdb8sw3/pdb

Classification: VIRAL PROTEIN
Organism(s): Human Immunodeficiency Virus 1 , Macaca

Deposited: 2023-05-17
Deposition Author(s): Ozorowski, G. , Torres, J.L. , Ward, A.B. , Zhang, S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.8 Å

8sw3
Literature

Bg505 gt1.1 sosip in complex with nhp fabs 12c11 and rm20a3

Ozorowski, G. , Torres, J.L. , Ward, A.B. , Zhang, S.

Primary Citation of Related Structures: 8SW3


Proteins
Molecule Chains Sequence Length Organism Sequence
BG505 GT1.1 SOSIP gp120 A 509 Human Immunodeficiency Virus 1 , Macaca MDAMKRGLCCVLLLCGAVFVSPSQEIHARFRRGARAENLWVTVYYGVPVWKDAETTLFCASDAKAYETKKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKRQKVHALFYKLDIVPINENQNTSYRLINCNTAAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSKDIRNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQWFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCDTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTDSTTETFRPSGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
BG505 GT1.1 SOSIP gp120 C 509 Human Immunodeficiency Virus 1 , Macaca MDAMKRGLCCVLLLCGAVFVSPSQEIHARFRRGARAENLWVTVYYGVPVWKDAETTLFCASDAKAYETKKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKRQKVHALFYKLDIVPINENQNTSYRLINCNTAAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSKDIRNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQWFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCDTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTDSTTETFRPSGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
BG505 GT1.1 SOSIP gp120 D 509 Human Immunodeficiency Virus 1 , Macaca MDAMKRGLCCVLLLCGAVFVSPSQEIHARFRRGARAENLWVTVYYGVPVWKDAETTLFCASDAKAYETKKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKRQKVHALFYKLDIVPINENQNTSYRLINCNTAAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSKDIRNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQWFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCDTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTDSTTETFRPSGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
RM20A3 heavy chain variable region G 125 Human Immunodeficiency Virus 1 , Macaca EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTVSS
RM20A3 heavy chain variable region J 125 Human Immunodeficiency Virus 1 , Macaca EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTVSS
RM20A3 heavy chain variable region K 125 Human Immunodeficiency Virus 1 , Macaca EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTVSS
RM20A3 light chain variable region I 111 Human Immunodeficiency Virus 1 , Macaca QSALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTVL
RM20A3 light chain variable region O 111 Human Immunodeficiency Virus 1 , Macaca QSALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTVL
RM20A3 light chain variable region P 111 Human Immunodeficiency Virus 1 , Macaca QSALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTVL
Envelope glycoprotein gp41 B 153 Human Immunodeficiency Virus 1 , Macaca AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Envelope glycoprotein gp41 E 153 Human Immunodeficiency Virus 1 , Macaca AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Envelope glycoprotein gp41 F 153 Human Immunodeficiency Virus 1 , Macaca AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
12C11 heavy chain variable region H 130 Human Immunodeficiency Virus 1 , Macaca QVQLQESGPGLVKPSETLSLTCAVSGNPVTAGFDWTWIRQSPGKGLEWIGHIYGASGSTNYNPSLESRVTISRDASRNQFSLKLTTVTAADTAVYYCARRGGDHRYSRMLTFTFTNFDFWGQGVLVTVSS
12C11 heavy chain variable region M 130 Human Immunodeficiency Virus 1 , Macaca QVQLQESGPGLVKPSETLSLTCAVSGNPVTAGFDWTWIRQSPGKGLEWIGHIYGASGSTNYNPSLESRVTISRDASRNQFSLKLTTVTAADTAVYYCARRGGDHRYSRMLTFTFTNFDFWGQGVLVTVSS
12C11 heavy chain variable region N 130 Human Immunodeficiency Virus 1 , Macaca QVQLQESGPGLVKPSETLSLTCAVSGNPVTAGFDWTWIRQSPGKGLEWIGHIYGASGSTNYNPSLESRVTISRDASRNQFSLKLTTVTAADTAVYYCARRGGDHRYSRMLTFTFTNFDFWGQGVLVTVSS
12C11 light chain variable region L 110 Human Immunodeficiency Virus 1 , Macaca QSVLTQPPSVSEAARKSVSISCSGSDSNIGSNSVSWFQQFPGTAPKLLIHFNNQRASGVSDRFSGSKSGTSASLAISGLQTDDEADYYCAAWDDSLTAAVFGTGTRLTVL
12C11 light chain variable region Q 110 Human Immunodeficiency Virus 1 , Macaca QSVLTQPPSVSEAARKSVSISCSGSDSNIGSNSVSWFQQFPGTAPKLLIHFNNQRASGVSDRFSGSKSGTSASLAISGLQTDDEADYYCAAWDDSLTAAVFGTGTRLTVL
12C11 light chain variable region R 110 Human Immunodeficiency Virus 1 , Macaca QSVLTQPPSVSEAARKSVSISCSGSDSNIGSNSVSWFQQFPGTAPKLLIHFNNQRASGVSDRFSGSKSGTSASLAISGLQTDDEADYYCAAWDDSLTAAVFGTGTRLTVL
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-05-17
Deposition Author(s): Ozorowski, G. , Torres, J.L. , Ward, A.B. , Zhang, S.