8SIY
Origin recognition complex associated (orca) protein bound to h4k20me3-nucleosome
PDB DOI: 10.2210/pdb8siy/pdb
Classification: REPLICATION Organism(s): Rattus Norvegicus , Synthetic Construct , Xenopus Laevis
Deposited: 2023-04-17 Deposition Author(s): Bleichert, F. , Ekundayo, B.E.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.9 Å
Origin recognition complex associated (orca) protein bound to h4k20me3-nucleosome
Bleichert, F. , Ekundayo, B.E.
Primary Citation of Related Structures: 8SIY
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Leucine-rich repeat and WD repeat-containing protein 1 | A | 651 | Rattus Norvegicus , Synthetic Construct , Xenopus Laevis | SNAMAPLTPQLLLQRGRPKTDRLGKIQSLNLSGLELLSEHLDPNLLGRLKKLKELDLSNNLLETLPANLGLSHLRILRCTNNQLGDVTTLHQFPELEELSLEGNPFLTVSDNLKVSFLLPKLRKVNGKDTASTCSQVESLDRELTNRVTALWQKFIATVNPEEEANKVQADFMRSAVRDVRYGPESLFEFTQWRVRMIAEELVASGGAQAHEANASVEHPQAAVGSKLRARKVTKRPDDDEISLPPTKRVRASPPAQTEDSPMDAAGGQAALHLEPLHFLQCHSRNNSPKDLETQLWACAFEPAREEGHSGATSQTVATCGGEAVCVIDCQTGLVLHKYKVPGEEFFSVAWTALTVATQAGHKKRWNMLAAAGLRGMVRLLHVRAGFCCSVIRAHKKAIATLCFSPTHETHLFTASYDKRIILWDIGVPNHDYKFQASQLLTLNCSSVPLRLCPVATCPDSFLLAGCEGGCGCWDVRLDQPQKQRVCEVNFVFSGDSEVSGQRVDGLAFVNEDVVASKGSGQGTIYLWSWSQTWASRGSQSVLPVVILAQLQWSPTSLAYFSLSTCPDKNLVLCGDEEGSVWIYDVEHLLKQPPPLETTLQPPTQILKWPQPVALGQPVTKTMVNTVVANAAFTYLTALTDSNIVSIWKTC |
| Histone H3.2 | C | 135 | Rattus Norvegicus , Synthetic Construct , Xenopus Laevis | ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA |
| Histone H3.2 | G | 135 | Rattus Norvegicus , Synthetic Construct , Xenopus Laevis | ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA |
| Histone H4 | D | 102 | Rattus Norvegicus , Synthetic Construct , Xenopus Laevis | SGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG |
| Histone H4 | H | 102 | Rattus Norvegicus , Synthetic Construct , Xenopus Laevis | SGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG |
| Histone H2A | E | 129 | Rattus Norvegicus , Synthetic Construct , Xenopus Laevis | SGRGKQGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKKTESAKSAKSK |
| Histone H2A | I | 129 | Rattus Norvegicus , Synthetic Construct , Xenopus Laevis | SGRGKQGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKKTESAKSAKSK |
| Histone H2B | F | 122 | Rattus Norvegicus , Synthetic Construct , Xenopus Laevis | AKSAPAPKKGSKKAVTKTQKKDGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK |
| Histone H2B | J | 122 | Rattus Norvegicus , Synthetic Construct , Xenopus Laevis | AKSAPAPKKGSKKAVTKTQKKDGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK |
| Origin recognition complex subunit 2 | B | 103 | Rattus Norvegicus , Synthetic Construct , Xenopus Laevis | SNAMSTLRLKEAKVPSVQFVGDDDVLSHILDREGGTKLKKEKVQLLVNPQKVIKKAECELEKSDLEVLEDQNYVEVLGRNIQESLGNGSAVDGRNKVYSFQHR |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Widom 601 DNA | k | 153 | NA | ATCCTGGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCCCCGCGTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATCCTGTGAT |
| Widom 601 DNA | l | 153 | NA | ATCACAGGATGTATATATCTGACACGTGCCTGGAGACTAGGGAGTAATCCCCTTGGCGGTTAAAACGCGGGGGACAGCGCGTACGTGCGTTTAAGCGGTGCTAGAGCTGTCTACGACCAATTGAGCGGCCTCGGCACCGGGATTCTCCAGGAT |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2023-04-17 Deposition Author(s): Bleichert, F. , Ekundayo, B.E.