PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8SIY

Origin recognition complex associated (orca) protein bound to h4k20me3-nucleosome

PDB DOI: 10.2210/pdb8siy/pdb

Classification: REPLICATION
Organism(s): Pandinus Imperator , Fremyella Diplosiphon , Mucilaginibacter Paludis Dsm 18603

Deposited: 2023-04-17
Deposition Author(s): Bleichert, F. , Ekundayo, B.E.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.9 Å

8siy
Literature

Origin recognition complex associated (orca) protein bound to h4k20me3-nucleosome

Bleichert, F. , Ekundayo, B.E.

Primary Citation of Related Structures: 8SIY


Proteins
Molecule Chains Sequence Length Organism Sequence
Leucine-rich repeat and WD repeat-containing protein 1 A 651 Pandinus Imperator , Fremyella Diplosiphon , Mucilaginibacter Paludis Dsm 18603 SNAMAPLTPQLLLQRGRPKTDRLGKIQSLNLSGLELLSEHLDPNLLGRLKKLKELDLSNNLLETLPANLGLSHLRILRCTNNQLGDVTTLHQFPELEELSLEGNPFLTVSDNLKVSFLLPKLRKVNGKDTASTCSQVESLDRELTNRVTALWQKFIATVNPEEEANKVQADFMRSAVRDVRYGPESLFEFTQWRVRMIAEELVASGGAQAHEANASVEHPQAAVGSKLRARKVTKRPDDDEISLPPTKRVRASPPAQTEDSPMDAAGGQAALHLEPLHFLQCHSRNNSPKDLETQLWACAFEPAREEGHSGATSQTVATCGGEAVCVIDCQTGLVLHKYKVPGEEFFSVAWTALTVATQAGHKKRWNMLAAAGLRGMVRLLHVRAGFCCSVIRAHKKAIATLCFSPTHETHLFTASYDKRIILWDIGVPNHDYKFQASQLLTLNCSSVPLRLCPVATCPDSFLLAGCEGGCGCWDVRLDQPQKQRVCEVNFVFSGDSEVSGQRVDGLAFVNEDVVASKGSGQGTIYLWSWSQTWASRGSQSVLPVVILAQLQWSPTSLAYFSLSTCPDKNLVLCGDEEGSVWIYDVEHLLKQPPPLETTLQPPTQILKWPQPVALGQPVTKTMVNTVVANAAFTYLTALTDSNIVSIWKTC
Histone H3.2 C 135 Pandinus Imperator , Fremyella Diplosiphon , Mucilaginibacter Paludis Dsm 18603 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H3.2 G 135 Pandinus Imperator , Fremyella Diplosiphon , Mucilaginibacter Paludis Dsm 18603 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H4 D 102 Pandinus Imperator , Fremyella Diplosiphon , Mucilaginibacter Paludis Dsm 18603 SGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H4 H 102 Pandinus Imperator , Fremyella Diplosiphon , Mucilaginibacter Paludis Dsm 18603 SGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H2A E 129 Pandinus Imperator , Fremyella Diplosiphon , Mucilaginibacter Paludis Dsm 18603 SGRGKQGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKKTESAKSAKSK
Histone H2A I 129 Pandinus Imperator , Fremyella Diplosiphon , Mucilaginibacter Paludis Dsm 18603 SGRGKQGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKKTESAKSAKSK
Histone H2B F 122 Pandinus Imperator , Fremyella Diplosiphon , Mucilaginibacter Paludis Dsm 18603 AKSAPAPKKGSKKAVTKTQKKDGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Histone H2B J 122 Pandinus Imperator , Fremyella Diplosiphon , Mucilaginibacter Paludis Dsm 18603 AKSAPAPKKGSKKAVTKTQKKDGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Origin recognition complex subunit 2 B 103 Pandinus Imperator , Fremyella Diplosiphon , Mucilaginibacter Paludis Dsm 18603 SNAMSTLRLKEAKVPSVQFVGDDDVLSHILDREGGTKLKKEKVQLLVNPQKVIKKAECELEKSDLEVLEDQNYVEVLGRNIQESLGNGSAVDGRNKVYSFQHR

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
Widom 601 DNA k 153 NA ATCCTGGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCCCCGCGTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATCCTGTGAT
Widom 601 DNA l 153 NA ATCACAGGATGTATATATCTGACACGTGCCTGGAGACTAGGGAGTAATCCCCTTGGCGGTTAAAACGCGGGGGACAGCGCGTACGTGCGTTTAAGCGGTGCTAGAGCTGTCTACGACCAATTGAGCGGCCTCGGCACCGGGATTCTCCAGGAT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-04-17
Deposition Author(s): Bleichert, F. , Ekundayo, B.E.