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8SIQ

Crystal structure of sars-cov-2 spike receptor-binding domain in complex with broadly neutralizing antibodies cc25.36 and cv38-142 fab

PDB DOI: 10.2210/pdb8siq/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2

Deposited: 2023-04-16
Deposition Author(s): Liu, H. , Wilson, I.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.5 Å

8siq
Literature

Crystal structure of sars-cov-2 spike receptor-binding domain in complex with broadly neutralizing antibodies cc25.36 and cv38-142 fab

Liu, H. , Wilson, I.A.

Primary Citation of Related Structures: 8SIQ


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike protein S1 A 205 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 TNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSGHHHHHH
CC25.36 Fab heavy chain H 230 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 EVQLVESGGGLVQPGGSLRLSCAASGFTFSSRNMNWVRQAPGKGLEWVSYISSSGSIYYADSVKGRFSISRDNVKNSLYLQMNSLRDEDTAVYYCARGVVGYYDMLTGPPDNWLDAWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
CC25.36 Fab light chain L 217 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
CV38-142 Fab heavy chain M 226 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 EVQLVQSGAEVKKPGESLKISCQGSGYSFTSYWIGWVRQMPGKGLEWMGIIYPGESDTRYSSSFQGHVTISADKSISTAYLQWSSLKASDTAMYYCARIRGVYSSGWIGGDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
CV38-142 Fab light chain N 217 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPRQWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2023-04-16
Deposition Author(s): Liu, H. , Wilson, I.A.