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8SIC

Crystal structure of epstein-barr virus glycoprotein 350 (gp350) in complex with cy137c02, a monoclonal antibody isolated from macaques immunized with a gp350 nanoparticle vaccine

PDB DOI: 10.2210/pdb8sic/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Human Herpesvirus 4 , Macaca Fascicularis

Deposited: 2023-04-14
Deposition Author(s): Chen, W.H. , Jensen, J.L. , Joyce, M.G. , Kanekiyo, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.76 Å

Literature

Crystal structure of epstein-barr virus glycoprotein 350 (gp350) in complex with cy137c02, a monoclonal antibody isolated from macaques immunized with a gp350 nanoparticle vaccine

Chen, W.H. , Jensen, J.L. , Joyce, M.G. , Kanekiyo, M.

Primary Citation of Related Structures: 8SIC


Proteins
Molecule Chains Sequence Length Organism Sequence
Cy137C02 Fab heavy chain A 222 Human Herpesvirus 4 , Macaca Fascicularis QLQLQESGPGLVKPSETLSLTCAVSGGSISGYYWSWIRQPPGKGPEWIGFIDGNTVGTNYNPSLKSRVTLSKDTSKNQFSLKVSSVTAADTAVYYCARKPLRRYFWFDVWGPGVLVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEIKT
Cy137C02 Fab heavy chain H 222 Human Herpesvirus 4 , Macaca Fascicularis QLQLQESGPGLVKPSETLSLTCAVSGGSISGYYWSWIRQPPGKGPEWIGFIDGNTVGTNYNPSLKSRVTLSKDTSKNQFSLKVSSVTAADTAVYYCARKPLRRYFWFDVWGPGVLVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEIKT
Cy137C02 Fab light chain B 215 Human Herpesvirus 4 , Macaca Fascicularis QSVLTQPPSVSGDPGQRVTISCTGSSSNIGAGYYVYWYQQFPGTAPKLLIYQDNKRPSGVSDRFSGSKSGTSASLTITGLQPGDEADYYCSAWDSSLSAVMFGRGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVEVAWKADGSAVNAGVETTKPSKQSNNKYAASSYLSLTSDQWKSHKSYSCQVTHEGSTVEKTVAPAE
Cy137C02 Fab light chain L 215 Human Herpesvirus 4 , Macaca Fascicularis QSVLTQPPSVSGDPGQRVTISCTGSSSNIGAGYYVYWYQQFPGTAPKLLIYQDNKRPSGVSDRFSGSKSGTSASLTITGLQPGDEADYYCSAWDSSLSAVMFGRGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVEVAWKADGSAVNAGVETTKPSKQSNNKYAASSYLSLTSDQWKSHKSYSCQVTHEGSTVEKTVAPAE
Envelope glycoprotein gp350 E 431 Human Herpesvirus 4 , Macaca Fascicularis MEAALLVCQYTIQSLIHLTGEDPGFFNVEIPEFPFYPTCNVCTADVNVTINFDVGGKKHQLDLDFGQLTPHTKAVYQPRGAFGGSENATNLFLLELLGAGELALTMRSKKLPINVTTGEEQQVSLESVDVYFQDVFGTMWCHHAEMQNPVYLIPETVPYIKWDNCNSTNITAVVRAQGLDVTLPLSLPTSAQDSNFSVKTEMLGNEIDIECIMEDGEISQVLPGDNKFNITCSGYESHVPSGGILTSTSPVATPIPGTGYAYSLRLTPRPVSRFLGNNSILYVFYSGNGPKASGGDYCIQSNIVFSDEIPASQDMPTNTTDITYVGDNATYSVPMVTSEDANSPNVTVTAFWAWPNNTETDFKCKWTLTSGTPSGCENISGAFASNRTFDITVSGLGTAPKTLIITRTATNATTTTHKVIFSKAPHHHHHH
Envelope glycoprotein gp350 G 431 Human Herpesvirus 4 , Macaca Fascicularis MEAALLVCQYTIQSLIHLTGEDPGFFNVEIPEFPFYPTCNVCTADVNVTINFDVGGKKHQLDLDFGQLTPHTKAVYQPRGAFGGSENATNLFLLELLGAGELALTMRSKKLPINVTTGEEQQVSLESVDVYFQDVFGTMWCHHAEMQNPVYLIPETVPYIKWDNCNSTNITAVVRAQGLDVTLPLSLPTSAQDSNFSVKTEMLGNEIDIECIMEDGEISQVLPGDNKFNITCSGYESHVPSGGILTSTSPVATPIPGTGYAYSLRLTPRPVSRFLGNNSILYVFYSGNGPKASGGDYCIQSNIVFSDEIPASQDMPTNTTDITYVGDNATYSVPMVTSEDANSPNVTVTAFWAWPNNTETDFKCKWTLTSGTPSGCENISGAFASNRTFDITVSGLGTAPKTLIITRTATNATTTTHKVIFSKAPHHHHHH
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2023-04-14
Deposition Author(s): Chen, W.H. , Jensen, J.L. , Joyce, M.G. , Kanekiyo, M.