Cryoem structure of vrc01-ch848.0358.80
PDB DOI: 10.2210/pdb8sal/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM Organism(s): Hiv-1 06Tg.Ht008 , Homo Sapiens
Deposited: 2023-04-01 Deposition Author(s): Acharya, P. , Bartesaghi, B. , Henderson, R. , Stalls, V. , Zhou, Y.
Cryoem structure of vrc01-ch848.0358.80
Acharya, P. , Bartesaghi, B. , Henderson, R. , Stalls, V. , Zhou, Y.
Primary Citation of Related Structures: 8SAL
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
CH0848.3.D0358.80.06CHIM.DS.6R.SOSIP gp120 | A | 475 | Hiv-1 06Tg.Ht008 , Homo Sapiens | AENLWVTVYYGVPVWKEAKTTLFCASDAKAYEKEVHNVWATHACVPTDPSPQELVLKNVTENFNMWKNDMVDQMHEDIISLWDQSLKPCVKLTPLCVTLNCSNARSNVNVTSINNTIMGEMKNCSFNTTTEIRDKEKKEYALFYKPDVVPLNETSNTSEYRLINCNTSACTQACPKVTFEPIPIHYCAPAGYAILKCNNKTFNGTGPCSNVSTVQCTHGIRPVVSTQLLLNGSLAEKEIVIRSENLTNNAKIIIVHLNTSVEIVCTRPGNNTRKSVRIGPGQTFYATGDIIGDIRQAHCNISEGQWNKTLHEVSKELQKHFPNKTIKYERSAGGDMEIATHSFNCGGEFFYCNTSNLFNGTYNGTYINTSSTSYITLQCRIKQIINMWQGVGRCMYAPPIAGNITCKSNITGLLLTRDGGTKNNSNEETFRPAGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR |
CH0848.3.D0358.80.06CHIM.DS.6R.SOSIP gp120 | E | 475 | Hiv-1 06Tg.Ht008 , Homo Sapiens | AENLWVTVYYGVPVWKEAKTTLFCASDAKAYEKEVHNVWATHACVPTDPSPQELVLKNVTENFNMWKNDMVDQMHEDIISLWDQSLKPCVKLTPLCVTLNCSNARSNVNVTSINNTIMGEMKNCSFNTTTEIRDKEKKEYALFYKPDVVPLNETSNTSEYRLINCNTSACTQACPKVTFEPIPIHYCAPAGYAILKCNNKTFNGTGPCSNVSTVQCTHGIRPVVSTQLLLNGSLAEKEIVIRSENLTNNAKIIIVHLNTSVEIVCTRPGNNTRKSVRIGPGQTFYATGDIIGDIRQAHCNISEGQWNKTLHEVSKELQKHFPNKTIKYERSAGGDMEIATHSFNCGGEFFYCNTSNLFNGTYNGTYINTSSTSYITLQCRIKQIINMWQGVGRCMYAPPIAGNITCKSNITGLLLTRDGGTKNNSNEETFRPAGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR |
CH0848.3.D0358.80.06CHIM.DS.6R.SOSIP gp120 | I | 475 | Hiv-1 06Tg.Ht008 , Homo Sapiens | AENLWVTVYYGVPVWKEAKTTLFCASDAKAYEKEVHNVWATHACVPTDPSPQELVLKNVTENFNMWKNDMVDQMHEDIISLWDQSLKPCVKLTPLCVTLNCSNARSNVNVTSINNTIMGEMKNCSFNTTTEIRDKEKKEYALFYKPDVVPLNETSNTSEYRLINCNTSACTQACPKVTFEPIPIHYCAPAGYAILKCNNKTFNGTGPCSNVSTVQCTHGIRPVVSTQLLLNGSLAEKEIVIRSENLTNNAKIIIVHLNTSVEIVCTRPGNNTRKSVRIGPGQTFYATGDIIGDIRQAHCNISEGQWNKTLHEVSKELQKHFPNKTIKYERSAGGDMEIATHSFNCGGEFFYCNTSNLFNGTYNGTYINTSSTSYITLQCRIKQIINMWQGVGRCMYAPPIAGNITCKSNITGLLLTRDGGTKNNSNEETFRPAGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR |
CH0848.3.D0358.80.06CHIM.DS.6R.SOSIP gp41 | B | 153 | Hiv-1 06Tg.Ht008 , Homo Sapiens | AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD |
CH0848.3.D0358.80.06CHIM.DS.6R.SOSIP gp41 | F | 153 | Hiv-1 06Tg.Ht008 , Homo Sapiens | AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD |
CH0848.3.D0358.80.06CHIM.DS.6R.SOSIP gp41 | J | 153 | Hiv-1 06Tg.Ht008 , Homo Sapiens | AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD |
VCR01 variable heavy chain | C | 121 | Hiv-1 06Tg.Ht008 , Homo Sapiens | QVQLVQSGGQMKKPGESMRISCRASGYEFIDCTLNWIRLAPGKRPEWMGWLKPRGGAVNYARPLQGRVTMTRDVYSDTAFLELRSLTVDDTAVYFCTRGKNCDYNWDFEHWGRGTPVIVSS |
VCR01 variable heavy chain | G | 121 | Hiv-1 06Tg.Ht008 , Homo Sapiens | QVQLVQSGGQMKKPGESMRISCRASGYEFIDCTLNWIRLAPGKRPEWMGWLKPRGGAVNYARPLQGRVTMTRDVYSDTAFLELRSLTVDDTAVYFCTRGKNCDYNWDFEHWGRGTPVIVSS |
VCR01 variable heavy chain | K | 121 | Hiv-1 06Tg.Ht008 , Homo Sapiens | QVQLVQSGGQMKKPGESMRISCRASGYEFIDCTLNWIRLAPGKRPEWMGWLKPRGGAVNYARPLQGRVTMTRDVYSDTAFLELRSLTVDDTAVYFCTRGKNCDYNWDFEHWGRGTPVIVSS |
VCR01 variable light chain | D | 103 | Hiv-1 06Tg.Ht008 , Homo Sapiens | EIVLTQSPGTLSLSPGETAIISCRTSQYGSXXLAWYQQRPGQAPRLVIYSGSTRAAGIPDRFSGSRWGPDYNLTISNLESGDFGVYYCQQYEFFGQGTKVQVD |
VCR01 variable light chain | H | 103 | Hiv-1 06Tg.Ht008 , Homo Sapiens | EIVLTQSPGTLSLSPGETAIISCRTSQYGSXXLAWYQQRPGQAPRLVIYSGSTRAAGIPDRFSGSRWGPDYNLTISNLESGDFGVYYCQQYEFFGQGTKVQVD |
VCR01 variable light chain | L | 103 | Hiv-1 06Tg.Ht008 , Homo Sapiens | EIVLTQSPGTLSLSPGETAIISCRTSQYGSXXLAWYQQRPGQAPRLVIYSGSTRAAGIPDRFSGSRWGPDYNLTISNLESGDFGVYYCQQYEFFGQGTKVQVD |
Method: ELECTRON MICROSCOPY
Deposited Date: 2023-04-01 Deposition Author(s): Acharya, P. , Bartesaghi, B. , Henderson, R. , Stalls, V. , Zhou, Y.