8S5A
The crystal structure of fan1 nuclease bound to 5' phosphorylated p(dg)/3'(dt-dt-dt-dt) double flap dna
PDB DOI: 10.2210/pdb8s5a/pdb
Classification: DNA Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2024-02-23 Deposition Author(s): Aretz, J. , Boudet, J. , Felsenfeld, D. , Finley, M. , Haque, T. , Jeyasankar, G. , Monteagudo, E. , Prasad, B.C. , Salerno-Kochan, A. , Thieulin-Pardo, G. , Thomsen, M. , Vogt, T.F.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.645 Å
The crystal structure of fan1 nuclease bound to 5' phosphorylated p(dg)/3'(dt-dt-dt-dt) double flap dna
Aretz, J. , Boudet, J. , Felsenfeld, D. , Finley, M. , Haque, T. , Jeyasankar, G. , Monteagudo, E. , Prasad, B.C. , Salerno-Kochan, A. , Thieulin-Pardo, G. , Thomsen, M. , Vogt, T.F.
Primary Citation of Related Structures: 8S5A
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Fanconi-associated nuclease 1 | A | 654 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | GPMGAHMTRNGPGQTTGHPYYLRSFLVVLKTVLENEDDMLLFDEQEKGIVTKFYQLSATGQKLYVRLFQRKLSWIKMTKLEYEEIALDLTPVIEELTNAGFLQTESELQELSEVLELLSAPELKSLAKTFHLVNPNGQKQQLVDAFLKLAKQHSVIGAVILKRAKALAGQSVRICKGPRAVFSRILLLFSLTDSMEDEDAACGGQGQLSTVLLVNLGRMEFPSYTINRKTHIFQDRDDLIRYAAATHMLSDISSAMANGNWEEAKELAQCAKRDWNRLKNHPSLRCHEDLPLFLRCFTVGWIYTRILSRFVEILQRLHMYEEAVRELESLLSQRIYCPDSRGRWWDRLALNLHQHLKRLEPTIKCITEGLADPEVRTGHRLSLYQRAVRLRESPSCKKFKHLFQQLPEMAVQDVKHVTITGRLCPQRGMCASVFVMEAGEAADPTTVLCSVEELALAHYRRSGFDQGIHGEGSTFSTLYGLLLWDIIFMDGIPDVFRNACQAFPLDLCTDSFFTSRRPALEARLQLIHDAPEESLRAWVAATWHEQEGRVASLVSWDRFTSLQQAQDLVSCLGGPVLSGVCRHLAADFRHCRGGLPDLVVWNSQSRHFKLVEVKGPNDRLSHKQMIWLAELQKLGAEVEVCHVVAVGAKSQSLS |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(*AP*AP*CP*AP*CP*GP*CP*CP*TP*AP*GP*AP*CP*TP*CP*CP*TP*CP*A)-3') | b | 19 | NA | AACACGCCTAGACTCCTCA |
| DNA (5'-D(P*GP*AP*GP*GP*CP*GP*TP*G)-3') | c | 8 | NA | GAGGCGTG |
| DNA (5'-D(*TP*TP*TP*GP*AP*GP*GP*AP*GP*TP*CP*TP*T)-3') | d | 16 | NA | TTTGAGGAGTCTTTTT |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2024-02-23 Deposition Author(s): Aretz, J. , Boudet, J. , Felsenfeld, D. , Finley, M. , Haque, T. , Jeyasankar, G. , Monteagudo, E. , Prasad, B.C. , Salerno-Kochan, A. , Thieulin-Pardo, G. , Thomsen, M. , Vogt, T.F.