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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8S36

Dna-bound type iv-a3 crispr effector in complex with ding helicase from k. pneumoniae (state ii)

PDB DOI: 10.2210/pdb8s36/pdb

Classification: ANTIVIRAL PROTEIN
Organism(s): Klebsiella Pneumoniae , Synthetic Construct

Deposited: 2024-02-19
Deposition Author(s): Cepaite, R. , Klein, N. , Malinauskaite, L. , Pausch, P. , Ragozius, V. , Randau, L. , Skorupskaite, A.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.9 Å

8s36
Literature

Dna-bound type iv-a3 crispr effector in complex with ding helicase from k. pneumoniae (state ii)

Cepaite, R. , Klein, N. , Malinauskaite, L. , Pausch, P. , Ragozius, V. , Randau, L. , Skorupskaite, A.

Primary Citation of Related Structures: 8S36


Proteins
Molecule Chains Sequence Length Organism Sequence
CRISPR type AFERR-associated protein Csf2 A 350 Klebsiella Pneumoniae , Synthetic Construct MRTLNFNGKISTLEPLTVTVKNAVSTSGHRLPRNGGFNAAPYFPGTSIRGTLRHAAHKVIVDRVGLNADGKSPFDLAEHFMLAQGVDINGEAETFAPGEINAGAELRSKNPLISLFGRWGLSGKVGIGNAIPDGDNQWGMFGGGARSIMFQRDESLMEFLETDQVDRLERLLEEQAEASVDISQIKTEQDALKKAMKSADKDTKAELQIKVRELDEKIQARKDQKQESRESIRRPIDPYEAFITGAELSHRMSIKNATDEEAGLFISALIRFAAEPRFGGHANHNCGLVEAHWTVTTWKPGELVPVTLGEIVITPNGVEITGDELFAMVKAFNENQSFDFTARGHHHHHH
CRISPR type AFERR-associated protein Csf2 B 350 Klebsiella Pneumoniae , Synthetic Construct MRTLNFNGKISTLEPLTVTVKNAVSTSGHRLPRNGGFNAAPYFPGTSIRGTLRHAAHKVIVDRVGLNADGKSPFDLAEHFMLAQGVDINGEAETFAPGEINAGAELRSKNPLISLFGRWGLSGKVGIGNAIPDGDNQWGMFGGGARSIMFQRDESLMEFLETDQVDRLERLLEEQAEASVDISQIKTEQDALKKAMKSADKDTKAELQIKVRELDEKIQARKDQKQESRESIRRPIDPYEAFITGAELSHRMSIKNATDEEAGLFISALIRFAAEPRFGGHANHNCGLVEAHWTVTTWKPGELVPVTLGEIVITPNGVEITGDELFAMVKAFNENQSFDFTARGHHHHHH
CRISPR type AFERR-associated protein Csf2 C 350 Klebsiella Pneumoniae , Synthetic Construct MRTLNFNGKISTLEPLTVTVKNAVSTSGHRLPRNGGFNAAPYFPGTSIRGTLRHAAHKVIVDRVGLNADGKSPFDLAEHFMLAQGVDINGEAETFAPGEINAGAELRSKNPLISLFGRWGLSGKVGIGNAIPDGDNQWGMFGGGARSIMFQRDESLMEFLETDQVDRLERLLEEQAEASVDISQIKTEQDALKKAMKSADKDTKAELQIKVRELDEKIQARKDQKQESRESIRRPIDPYEAFITGAELSHRMSIKNATDEEAGLFISALIRFAAEPRFGGHANHNCGLVEAHWTVTTWKPGELVPVTLGEIVITPNGVEITGDELFAMVKAFNENQSFDFTARGHHHHHH
CRISPR type AFERR-associated protein Csf2 D 350 Klebsiella Pneumoniae , Synthetic Construct MRTLNFNGKISTLEPLTVTVKNAVSTSGHRLPRNGGFNAAPYFPGTSIRGTLRHAAHKVIVDRVGLNADGKSPFDLAEHFMLAQGVDINGEAETFAPGEINAGAELRSKNPLISLFGRWGLSGKVGIGNAIPDGDNQWGMFGGGARSIMFQRDESLMEFLETDQVDRLERLLEEQAEASVDISQIKTEQDALKKAMKSADKDTKAELQIKVRELDEKIQARKDQKQESRESIRRPIDPYEAFITGAELSHRMSIKNATDEEAGLFISALIRFAAEPRFGGHANHNCGLVEAHWTVTTWKPGELVPVTLGEIVITPNGVEITGDELFAMVKAFNENQSFDFTARGHHHHHH
CRISPR type AFERR-associated protein Csf2 E 350 Klebsiella Pneumoniae , Synthetic Construct MRTLNFNGKISTLEPLTVTVKNAVSTSGHRLPRNGGFNAAPYFPGTSIRGTLRHAAHKVIVDRVGLNADGKSPFDLAEHFMLAQGVDINGEAETFAPGEINAGAELRSKNPLISLFGRWGLSGKVGIGNAIPDGDNQWGMFGGGARSIMFQRDESLMEFLETDQVDRLERLLEEQAEASVDISQIKTEQDALKKAMKSADKDTKAELQIKVRELDEKIQARKDQKQESRESIRRPIDPYEAFITGAELSHRMSIKNATDEEAGLFISALIRFAAEPRFGGHANHNCGLVEAHWTVTTWKPGELVPVTLGEIVITPNGVEITGDELFAMVKAFNENQSFDFTARGHHHHHH
CRISPR type AFERR-associated protein Csf2 L 350 Klebsiella Pneumoniae , Synthetic Construct MRTLNFNGKISTLEPLTVTVKNAVSTSGHRLPRNGGFNAAPYFPGTSIRGTLRHAAHKVIVDRVGLNADGKSPFDLAEHFMLAQGVDINGEAETFAPGEINAGAELRSKNPLISLFGRWGLSGKVGIGNAIPDGDNQWGMFGGGARSIMFQRDESLMEFLETDQVDRLERLLEEQAEASVDISQIKTEQDALKKAMKSADKDTKAELQIKVRELDEKIQARKDQKQESRESIRRPIDPYEAFITGAELSHRMSIKNATDEEAGLFISALIRFAAEPRFGGHANHNCGLVEAHWTVTTWKPGELVPVTLGEIVITPNGVEITGDELFAMVKAFNENQSFDFTARGHHHHHH
CRISPR type AFERR-associated protein Csf3 F 235 Klebsiella Pneumoniae , Synthetic Construct MLNFKPYRVIMSSLTPVVISGIAPSLDGILYEALSQAIPSNEPGVVLARLKEILLFNDELGVFHASSLRFGITPEQGIGATTSMRCDYLSPEKLSTAMFSPRTRRGLFTRVLLTGGPTKRRMTTRPAYSAPYLTFDFVGSSEAVEILLNHAHVGVGYDYFSAANGEFNNVTILPLDIDTSISNEGMALRPVPVNSGLNGIKGVSPLIPPYFVGEKLNIVHPAPVRTQLISSLLRG
CRISPR type AFERR-associated protein Csf1 G 263 Klebsiella Pneumoniae , Synthetic Construct MNHPVESVYSALTSILLPYMGEPVPVQRNCSCCGRAPSEFDGVGFELVNAYRERVVHCRPCQTFFVSAPELMGVENPKKPTTGQKFGMWSGVGAVINVEDNSSVLLAPQGVVNKLPEHFFDHVEVITATSGQHLEYLFNTELKFPLIYIQNFGVKTYELVRSLRVSLSADAIYTCADQLLTRQNEVLYMLDLKKAKELHQEIKNYSKKEMDIFIRTVTLLAYSRITPEAASNEFKKNNLIPLLLLLPTDPHQRLSILHLLKKV
DEAD/DEAH box helicase M 624 Klebsiella Pneumoniae , Synthetic Construct MNTSAVFESAGLSLRKVQQDYIEAAAGALTQDHKVALISAETGVGKTLGYLVPALLILLKNPEAKFVIATNSHALMHQIFRSDRPLLEQIAEQCGIKVTFSRLMGKANYVSLEKVRGLLLMDEFTDLDTVKVLEKLANWSKPLVEFEEEYGELPAQITPEMVTYSIWDDIQDIDDIRLNALSANFIVTTHAMVMVDCMCNHRILGDKENMYLIIDEADIFVDMLEVWKQRRFNLRELTSAFNEHIPRNGVHVIDQLMNDVTSIAGDLHFCSTPAAVALFDNSFNALSKVGREIKNEAARKAFFDCIYSWEMLGLSGGQKGVGVSNKRREPALIAVNPFIGMNVGRYCTQWRSALLTSATLSITSTPETGMEWLCKALGLTSDTISIRKIFSPDVYGSMKLTIAGADFPKVFNDPKEQIFSGQWLKAVVEQLSCIQGPALVLTASHYETRMIANQLGEVSQPVYIQKAGQALSEIIKQYQEKPGILISAGASVGVSPRGENGEQIFQDLIITRIPFLPPDRMKAESLYGYLKERGYSRTFEAVNRNIYLENLRKVIRKAKQSVGRGIRSENDTVRIIILDPRFPEPTDLSSKHRSLEHIIPVRFRREYRSCEILSPAYFEEDIQC

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
crRNA h 61 NA UUAUCGGCGAGACCGGGAUGCACCUCCCGAAGGGUCUCGGUGUUUCCCCUGCGUGCGGGGG
TS-DNA i 60 NA CCCTCCCTCCAGCTTCCGAGACCCTTCGGGAGGTGCATCCCGGTCTCGCTTGGCCTCCTC
NTS-NDA j 60 NA GAGGAGGCCAAGATCTCAATTTCGTACAAGAAATCCTTTGAGATGAAGCTGGAGGGAGGG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-02-19
Deposition Author(s): Cepaite, R. , Klein, N. , Malinauskaite, L. , Pausch, P. , Ragozius, V. , Randau, L. , Skorupskaite, A.