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FASTA Sequence PDB Format mmCIF Format
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8S0M

Crystal structure of the hku1 receptor binding domain in complex with tmprss2 and the nanobody a01

PDB DOI: 10.2210/pdb8s0m/pdb

Classification: VIRAL PROTEIN/RECEPTOR
Organism(s): Homo Sapiens , Human Coronavirus Hku1 (Isolate N5) , Vicugna Pacos

Deposited: 2024-02-14
Deposition Author(s): Duquerroy, S. , Fernandez, I. , Rey, F.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.55 Å

8s0m
Literature

Crystal structure of the hku1 receptor binding domain in complex with tmprss2 and the nanobody a01

Duquerroy, S. , Fernandez, I. , Rey, F.

Primary Citation of Related Structures: 8S0M


Proteins
Molecule Chains Sequence Length Organism Sequence
Transmembrane protease serine 2 B 395 Homo Sapiens , Human Coronavirus Hku1 (Isolate N5) , Vicugna Pacos KFMGSKCSNSGIECDSSGTCINPSNWCDGVSHCPGGEDENRCVRLYGPNFILQVYSSQRKSWHPVCQDDWNENYGRAACRDMGYKNNFYSSQGIVDDSGSTSFMKLNTSAGNVDIYKKLYHSDACSSKAVVSLRCIACGVNLNSSRQSRIVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDAGGPLVTSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRADGGPFEDDDDK
Transmembrane protease serine 2 E 395 Homo Sapiens , Human Coronavirus Hku1 (Isolate N5) , Vicugna Pacos KFMGSKCSNSGIECDSSGTCINPSNWCDGVSHCPGGEDENRCVRLYGPNFILQVYSSQRKSWHPVCQDDWNENYGRAACRDMGYKNNFYSSQGIVDDSGSTSFMKLNTSAGNVDIYKKLYHSDACSSKAVVSLRCIACGVNLNSSRQSRIVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDAGGPLVTSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRADGGPFEDDDDK
Nanobody A01 U 136 Homo Sapiens , Human Coronavirus Hku1 (Isolate N5) , Vicugna Pacos MAQVQLVESGGGLVQPGGSLRLSCVVSGFSLDYYAIGWFRQAPGKEREGVSCIGSSGDKTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAESALYSDCTEEQNPMLYDYWGQGTQVTVSSHHHHHH
Nanobody A01 V 136 Homo Sapiens , Human Coronavirus Hku1 (Isolate N5) , Vicugna Pacos MAQVQLVESGGGLVQPGGSLRLSCVVSGFSLDYYAIGWFRQAPGKEREGVSCIGSSGDKTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAESALYSDCTEEQNPMLYDYWGQGTQVTVSSHHHHHH
Spike protein S1 A 366 Homo Sapiens , Human Coronavirus Hku1 (Isolate N5) , Vicugna Pacos SGFTVKPVATVYRRIPNLPDCDIDNWLNNVSVPSPLNWERRIFSNCNFNLSTLLRLVHVDSFSCNNLDKSKIFGSCFNSITVDKFAIPNRRRDDLQLGSSGFLQSSNYKIDISSSSCQLYYSLPLVNVTINNFNPSSWNRRYGFGSFNLSSYDVVYSDHCFSVNSDFCPCADPSVVNSCAKSKPPSAICPAGTKYRHCDLDTTLYVKNWCRCSCLPDPISTYSPNTCPQKKVVVGIGEHCPGLGINEEKCGTQLNHSSCFCSPDAFLGWSFDSCISNNRCNIFSNFIFNGINSGTTCSNDLLYSNTEISTGVCVNYDLYGITGQGIFKEVSAVYYNNWQNLLYDSNGNIIGFKDFLTNKTYTILPC
Spike protein S1 D 366 Homo Sapiens , Human Coronavirus Hku1 (Isolate N5) , Vicugna Pacos SGFTVKPVATVYRRIPNLPDCDIDNWLNNVSVPSPLNWERRIFSNCNFNLSTLLRLVHVDSFSCNNLDKSKIFGSCFNSITVDKFAIPNRRRDDLQLGSSGFLQSSNYKIDISSSSCQLYYSLPLVNVTINNFNPSSWNRRYGFGSFNLSSYDVVYSDHCFSVNSDFCPCADPSVVNSCAKSKPPSAICPAGTKYRHCDLDTTLYVKNWCRCSCLPDPISTYSPNTCPQKKVVVGIGEHCPGLGINEEKCGTQLNHSSCFCSPDAFLGWSFDSCISNNRCNIFSNFIFNGINSGTTCSNDLLYSNTEISTGVCVNYDLYGITGQGIFKEVSAVYYNNWQNLLYDSNGNIIGFKDFLTNKTYTILPC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2024-02-14
Deposition Author(s): Duquerroy, S. , Fernandez, I. , Rey, F.