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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8RTF

Crystal structure of trypanosoma congolense pyruvate kinase in complex with a single-domain antibody (tcopyk-sdab42)

PDB DOI: 10.2210/pdb8rtf/pdb

Classification: TRANSFERASE
Organism(s): Trypanosoma Congolense , Vicugna Pacos

Deposited: 2024-01-26
Deposition Author(s): Sterckx, Y.G.-J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.8 Å

Literature

Crystal structure of trypanosoma congolense pyruvate kinase in complex with a single-domain antibody (tcopyk-sdab42)

Sterckx, Y.G.-J.

Primary Citation of Related Structures: 8RTF


Proteins
Molecule Chains Sequence Length Organism Sequence
Pyruvate kinase A 514 Trypanosoma Congolense , Vicugna Pacos MSQLQHNIGLSIFEPVAKHRANRIICTIGPSTQSVEALKGLMKSGMSVARMNFSHGSYEYHQTTINNVRAAAAELGLHIGIALDTKGPEIRTGLFKDGEATYAPGDTVLVTTDPAFEKIGTKEKFYVDYPQLPNVVRPGGLIYVDDGVLTLRVLSKEDDCTLKCHVNNHHRLTDRKGINLPGCEVDLPAVSEKDRKDLQFGVEQGVDMIFASFIRTADQVREVRAALGEKGKDTLIISKIENHQGVQNIDAIIEASDGIMVARGDLGVEIPAEKVVVAQMCIISKCNVAGKPVICATQMLESMTTNPRPTRAEVTDVANAVFNGADCVMLSGETAKGKYPNEVVQYMVRICIEAQSATHDSVMFNSIKNLQKIPMSPEEAVCSSAVSSAFEVQAKAILVLSNTGRSARLISKYRPNCPIICATTRLLTCRQLNVTRSVESVYYDVDAHGEDNDREKRVQLGVDWAKTKGYVSAGDVMVIVHADHSVKGYPNQTRLVRVRENLYFQSGGHHHHHH
Pyruvate kinase B 514 Trypanosoma Congolense , Vicugna Pacos MSQLQHNIGLSIFEPVAKHRANRIICTIGPSTQSVEALKGLMKSGMSVARMNFSHGSYEYHQTTINNVRAAAAELGLHIGIALDTKGPEIRTGLFKDGEATYAPGDTVLVTTDPAFEKIGTKEKFYVDYPQLPNVVRPGGLIYVDDGVLTLRVLSKEDDCTLKCHVNNHHRLTDRKGINLPGCEVDLPAVSEKDRKDLQFGVEQGVDMIFASFIRTADQVREVRAALGEKGKDTLIISKIENHQGVQNIDAIIEASDGIMVARGDLGVEIPAEKVVVAQMCIISKCNVAGKPVICATQMLESMTTNPRPTRAEVTDVANAVFNGADCVMLSGETAKGKYPNEVVQYMVRICIEAQSATHDSVMFNSIKNLQKIPMSPEEAVCSSAVSSAFEVQAKAILVLSNTGRSARLISKYRPNCPIICATTRLLTCRQLNVTRSVESVYYDVDAHGEDNDREKRVQLGVDWAKTKGYVSAGDVMVIVHADHSVKGYPNQTRLVRVRENLYFQSGGHHHHHH
Pyruvate kinase C 514 Trypanosoma Congolense , Vicugna Pacos MSQLQHNIGLSIFEPVAKHRANRIICTIGPSTQSVEALKGLMKSGMSVARMNFSHGSYEYHQTTINNVRAAAAELGLHIGIALDTKGPEIRTGLFKDGEATYAPGDTVLVTTDPAFEKIGTKEKFYVDYPQLPNVVRPGGLIYVDDGVLTLRVLSKEDDCTLKCHVNNHHRLTDRKGINLPGCEVDLPAVSEKDRKDLQFGVEQGVDMIFASFIRTADQVREVRAALGEKGKDTLIISKIENHQGVQNIDAIIEASDGIMVARGDLGVEIPAEKVVVAQMCIISKCNVAGKPVICATQMLESMTTNPRPTRAEVTDVANAVFNGADCVMLSGETAKGKYPNEVVQYMVRICIEAQSATHDSVMFNSIKNLQKIPMSPEEAVCSSAVSSAFEVQAKAILVLSNTGRSARLISKYRPNCPIICATTRLLTCRQLNVTRSVESVYYDVDAHGEDNDREKRVQLGVDWAKTKGYVSAGDVMVIVHADHSVKGYPNQTRLVRVRENLYFQSGGHHHHHH
Pyruvate kinase D 514 Trypanosoma Congolense , Vicugna Pacos MSQLQHNIGLSIFEPVAKHRANRIICTIGPSTQSVEALKGLMKSGMSVARMNFSHGSYEYHQTTINNVRAAAAELGLHIGIALDTKGPEIRTGLFKDGEATYAPGDTVLVTTDPAFEKIGTKEKFYVDYPQLPNVVRPGGLIYVDDGVLTLRVLSKEDDCTLKCHVNNHHRLTDRKGINLPGCEVDLPAVSEKDRKDLQFGVEQGVDMIFASFIRTADQVREVRAALGEKGKDTLIISKIENHQGVQNIDAIIEASDGIMVARGDLGVEIPAEKVVVAQMCIISKCNVAGKPVICATQMLESMTTNPRPTRAEVTDVANAVFNGADCVMLSGETAKGKYPNEVVQYMVRICIEAQSATHDSVMFNSIKNLQKIPMSPEEAVCSSAVSSAFEVQAKAILVLSNTGRSARLISKYRPNCPIICATTRLLTCRQLNVTRSVESVYYDVDAHGEDNDREKRVQLGVDWAKTKGYVSAGDVMVIVHADHSVKGYPNQTRLVRVRENLYFQSGGHHHHHH
Pyruvate kinase E 514 Trypanosoma Congolense , Vicugna Pacos MSQLQHNIGLSIFEPVAKHRANRIICTIGPSTQSVEALKGLMKSGMSVARMNFSHGSYEYHQTTINNVRAAAAELGLHIGIALDTKGPEIRTGLFKDGEATYAPGDTVLVTTDPAFEKIGTKEKFYVDYPQLPNVVRPGGLIYVDDGVLTLRVLSKEDDCTLKCHVNNHHRLTDRKGINLPGCEVDLPAVSEKDRKDLQFGVEQGVDMIFASFIRTADQVREVRAALGEKGKDTLIISKIENHQGVQNIDAIIEASDGIMVARGDLGVEIPAEKVVVAQMCIISKCNVAGKPVICATQMLESMTTNPRPTRAEVTDVANAVFNGADCVMLSGETAKGKYPNEVVQYMVRICIEAQSATHDSVMFNSIKNLQKIPMSPEEAVCSSAVSSAFEVQAKAILVLSNTGRSARLISKYRPNCPIICATTRLLTCRQLNVTRSVESVYYDVDAHGEDNDREKRVQLGVDWAKTKGYVSAGDVMVIVHADHSVKGYPNQTRLVRVRENLYFQSGGHHHHHH
Pyruvate kinase F 514 Trypanosoma Congolense , Vicugna Pacos MSQLQHNIGLSIFEPVAKHRANRIICTIGPSTQSVEALKGLMKSGMSVARMNFSHGSYEYHQTTINNVRAAAAELGLHIGIALDTKGPEIRTGLFKDGEATYAPGDTVLVTTDPAFEKIGTKEKFYVDYPQLPNVVRPGGLIYVDDGVLTLRVLSKEDDCTLKCHVNNHHRLTDRKGINLPGCEVDLPAVSEKDRKDLQFGVEQGVDMIFASFIRTADQVREVRAALGEKGKDTLIISKIENHQGVQNIDAIIEASDGIMVARGDLGVEIPAEKVVVAQMCIISKCNVAGKPVICATQMLESMTTNPRPTRAEVTDVANAVFNGADCVMLSGETAKGKYPNEVVQYMVRICIEAQSATHDSVMFNSIKNLQKIPMSPEEAVCSSAVSSAFEVQAKAILVLSNTGRSARLISKYRPNCPIICATTRLLTCRQLNVTRSVESVYYDVDAHGEDNDREKRVQLGVDWAKTKGYVSAGDVMVIVHADHSVKGYPNQTRLVRVRENLYFQSGGHHHHHH
Camelid single-domain antibody 42 (sdAb42) G 149 Trypanosoma Congolense , Vicugna Pacos QVQLQESGGGLVQSGGSLKLSCAASGSNFSSGRTFSTDAIGWFRQAPGKEREFVGGISWNGGITDYVDSVKGRFTISRDNAKNTVYLQMNSLQPEDTAVYYCAGRDSWYFSKVPDEYRYWGQGTQVTVSSAAAYPYDVPDYGSHHHHHH
Camelid single-domain antibody 42 (sdAb42) H 149 Trypanosoma Congolense , Vicugna Pacos QVQLQESGGGLVQSGGSLKLSCAASGSNFSSGRTFSTDAIGWFRQAPGKEREFVGGISWNGGITDYVDSVKGRFTISRDNAKNTVYLQMNSLQPEDTAVYYCAGRDSWYFSKVPDEYRYWGQGTQVTVSSAAAYPYDVPDYGSHHHHHH
Camelid single-domain antibody 42 (sdAb42) I 149 Trypanosoma Congolense , Vicugna Pacos QVQLQESGGGLVQSGGSLKLSCAASGSNFSSGRTFSTDAIGWFRQAPGKEREFVGGISWNGGITDYVDSVKGRFTISRDNAKNTVYLQMNSLQPEDTAVYYCAGRDSWYFSKVPDEYRYWGQGTQVTVSSAAAYPYDVPDYGSHHHHHH
Camelid single-domain antibody 42 (sdAb42) J 149 Trypanosoma Congolense , Vicugna Pacos QVQLQESGGGLVQSGGSLKLSCAASGSNFSSGRTFSTDAIGWFRQAPGKEREFVGGISWNGGITDYVDSVKGRFTISRDNAKNTVYLQMNSLQPEDTAVYYCAGRDSWYFSKVPDEYRYWGQGTQVTVSSAAAYPYDVPDYGSHHHHHH
Camelid single-domain antibody 42 (sdAb42) K 149 Trypanosoma Congolense , Vicugna Pacos QVQLQESGGGLVQSGGSLKLSCAASGSNFSSGRTFSTDAIGWFRQAPGKEREFVGGISWNGGITDYVDSVKGRFTISRDNAKNTVYLQMNSLQPEDTAVYYCAGRDSWYFSKVPDEYRYWGQGTQVTVSSAAAYPYDVPDYGSHHHHHH
Camelid single-domain antibody 42 (sdAb42) L 149 Trypanosoma Congolense , Vicugna Pacos QVQLQESGGGLVQSGGSLKLSCAASGSNFSSGRTFSTDAIGWFRQAPGKEREFVGGISWNGGITDYVDSVKGRFTISRDNAKNTVYLQMNSLQPEDTAVYYCAGRDSWYFSKVPDEYRYWGQGTQVTVSSAAAYPYDVPDYGSHHHHHH
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2024-01-26
Deposition Author(s): Sterckx, Y.G.-J.