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FASTA Sequence PDB Format mmCIF Format
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8RPX

Nhoi restriction endonuclease in complex with quadruply methylated dna target

PDB DOI: 10.2210/pdb8rpx/pdb

Classification: HYDROLASE
Organism(s): Nitrolancea Hollandica , Synthetic Construct

Deposited: 2024-01-17
Deposition Author(s): Bochtler, M. , Gilski, M. , Krakowska, K. , Rafalski, D.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.81 Å

8rpx
Literature

Nhoi restriction endonuclease in complex with quadruply methylated dna target

Bochtler, M. , Gilski, M. , Krakowska, K. , Rafalski, D.

Primary Citation of Related Structures: 8RPX


Proteins
Molecule Chains Sequence Length Organism Sequence
Restriction endonuclease (NhoI) A 171 Nitrolancea Hollandica , Synthetic Construct GSMSRPPSYAGDMNLENLTTRELLAVSRASLRELKRRGVIRSGNAPAGDYAELLVQRATDGELANASQKSWDIRTTEGDRLQVKARVITDEHANGERQLSTIRSWDFDAAVIVLFDDNFRVWRAARVPAAIMKEAAYYSQHVRGYTVYAKDALLNHSEVEDWTEQLRSVEQ
Restriction endonuclease (NhoI) B 171 Nitrolancea Hollandica , Synthetic Construct GSMSRPPSYAGDMNLENLTTRELLAVSRASLRELKRRGVIRSGNAPAGDYAELLVQRATDGELANASQKSWDIRTTEGDRLQVKARVITDEHANGERQLSTIRSWDFDAAVIVLFDDNFRVWRAARVPAAIMKEAAYYSQHVRGYTVYAKDALLNHSEVEDWTEQLRSVEQ
Restriction endonuclease (NhoI) C 171 Nitrolancea Hollandica , Synthetic Construct GSMSRPPSYAGDMNLENLTTRELLAVSRASLRELKRRGVIRSGNAPAGDYAELLVQRATDGELANASQKSWDIRTTEGDRLQVKARVITDEHANGERQLSTIRSWDFDAAVIVLFDDNFRVWRAARVPAAIMKEAAYYSQHVRGYTVYAKDALLNHSEVEDWTEQLRSVEQ
Restriction endonuclease (NhoI) D 171 Nitrolancea Hollandica , Synthetic Construct GSMSRPPSYAGDMNLENLTTRELLAVSRASLRELKRRGVIRSGNAPAGDYAELLVQRATDGELANASQKSWDIRTTEGDRLQVKARVITDEHANGERQLSTIRSWDFDAAVIVLFDDNFRVWRAARVPAAIMKEAAYYSQHVRGYTVYAKDALLNHSEVEDWTEQLRSVEQ
Restriction endonuclease (NhoI) E 171 Nitrolancea Hollandica , Synthetic Construct GSMSRPPSYAGDMNLENLTTRELLAVSRASLRELKRRGVIRSGNAPAGDYAELLVQRATDGELANASQKSWDIRTTEGDRLQVKARVITDEHANGERQLSTIRSWDFDAAVIVLFDDNFRVWRAARVPAAIMKEAAYYSQHVRGYTVYAKDALLNHSEVEDWTEQLRSVEQ

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*CP*TP*GP*(5CM)P*AP*GP*(5CM)P*TP*C)-3') f 9 NA CTGCAGCTC
DNA (5'-D(*CP*TP*GP*(5CM)P*AP*GP*(5CM)P*TP*C)-3') h 9 NA CTGCAGCTC
DNA (5'-D(*CP*TP*GP*(5CM)P*AP*GP*(5CM)P*TP*C)-3') j 9 NA CTGCAGCTC
DNA(5'-D(*GP*AP*GP*(5CM)P*TP*GP*(5CM)P*AP*GP)-3') g 9 NA GAGCTGCAG
DNA(5'-D(*GP*AP*GP*(5CM)P*TP*GP*(5CM)P*AP*GP)-3') i 9 NA GAGCTGCAG
DNA(5'-D(*GP*AP*GP*(5CM)P*TP*GP*(5CM)P*AP*GP)-3') k 9 NA GAGCTGCAG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2024-01-17
Deposition Author(s): Bochtler, M. , Gilski, M. , Krakowska, K. , Rafalski, D.