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8RM1

Cryo-em structure of a foamy virus fusion glycoprotein in the postfusion conformation

PDB DOI: 10.2210/pdb8rm1/pdb

Classification: VIRUS
Organism(s): Simian Foamy Virus

Deposited: 2024-01-04
Deposition Author(s): Backovic, M. , Fernandez, I.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.1 Å

8rm1
Literature

Cryo-em structure of a foamy virus fusion glycoprotein in the postfusion conformation

Backovic, M. , Fernandez, I.

Primary Citation of Related Structures: 8RM1


Proteins
Molecule Chains Sequence Length Organism Sequence
Envelope glycoprotein gp130 A 444 Simian Foamy Virus ALRAQHPVPKYVEVNMTSIPQGVFYQPHPEPIIHTERVLGLSQVLMINSENVANSANLSQETKALLTEMVNEEMQGLSDVMIDFEIPLGDPRDQEQYIHRKCYQEFAHCYLVKYKTPQPWPNEGLIADQCPLPGLADVSFYPYQAIWDYYAKIENIRPANWTSSKLYGKARMGSYYIPKRLRNINNTHILFCSDVLYSKWYNLQNSILQNENELTKRLSNLTIGNKLKNRALPYEWAKGGLNRLFRNISVLDVCSRPEMVLLLNKTYYTFSLWEGDCNITRYNVNETVPECKDFPHRRFNDHPYSCRLWRYREGKEEVKCLTSDHTRCLYYPEYSNPEALFDFGFLSYMRNFPGPQCIESTSIRQQDYEVYSIYQECKLASKTYGIDSVLFSLKNFLNYTGKPVNEMPNARAFVGLIDPKFPPTYPNITRDQYQGCNINQRRKR
Envelope glycoprotein gp130 B 444 Simian Foamy Virus ALRAQHPVPKYVEVNMTSIPQGVFYQPHPEPIIHTERVLGLSQVLMINSENVANSANLSQETKALLTEMVNEEMQGLSDVMIDFEIPLGDPRDQEQYIHRKCYQEFAHCYLVKYKTPQPWPNEGLIADQCPLPGLADVSFYPYQAIWDYYAKIENIRPANWTSSKLYGKARMGSYYIPKRLRNINNTHILFCSDVLYSKWYNLQNSILQNENELTKRLSNLTIGNKLKNRALPYEWAKGGLNRLFRNISVLDVCSRPEMVLLLNKTYYTFSLWEGDCNITRYNVNETVPECKDFPHRRFNDHPYSCRLWRYREGKEEVKCLTSDHTRCLYYPEYSNPEALFDFGFLSYMRNFPGPQCIESTSIRQQDYEVYSIYQECKLASKTYGIDSVLFSLKNFLNYTGKPVNEMPNARAFVGLIDPKFPPTYPNITRDQYQGCNINQRRKR
Envelope glycoprotein gp130 C 444 Simian Foamy Virus ALRAQHPVPKYVEVNMTSIPQGVFYQPHPEPIIHTERVLGLSQVLMINSENVANSANLSQETKALLTEMVNEEMQGLSDVMIDFEIPLGDPRDQEQYIHRKCYQEFAHCYLVKYKTPQPWPNEGLIADQCPLPGLADVSFYPYQAIWDYYAKIENIRPANWTSSKLYGKARMGSYYIPKRLRNINNTHILFCSDVLYSKWYNLQNSILQNENELTKRLSNLTIGNKLKNRALPYEWAKGGLNRLFRNISVLDVCSRPEMVLLLNKTYYTFSLWEGDCNITRYNVNETVPECKDFPHRRFNDHPYSCRLWRYREGKEEVKCLTSDHTRCLYYPEYSNPEALFDFGFLSYMRNFPGPQCIESTSIRQQDYEVYSIYQECKLASKTYGIDSVLFSLKNFLNYTGKPVNEMPNARAFVGLIDPKFPPTYPNITRDQYQGCNINQRRKR
Envelope glycoprotein gp130 D 372 Simian Foamy Virus EVNNNYSKLRSMGYALTGAVQTLAQISDINDQNLQQGIYLLRDHIVTLMEATLHDISIMEGMFAVQHVHTHLNHLRTMLMERRIDWTYMSSSWLQTQLQKSDDEMKVIKRTARSLVYYVKQTYNSLTATAWEIGLYYELIIPRHIYLNNWQIVNIGHLIKSAGQLTHVTLSHPYEIINRECSNTLYLHLEECRRLDYVICDVVKIVQPCGNSSDSSDCPVWAEPVKEPHVQISPLKNGSYLVLASSTDCQIPPYVPSVVTVNETTQCFGVTFKKPLVAEEKTSLEPQLPHLQLRLPHLVGIIAKIKGIKIEVTSSGESIKDQLERAKAELLRLDIHEDDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK
Envelope glycoprotein gp130 E 372 Simian Foamy Virus EVNNNYSKLRSMGYALTGAVQTLAQISDINDQNLQQGIYLLRDHIVTLMEATLHDISIMEGMFAVQHVHTHLNHLRTMLMERRIDWTYMSSSWLQTQLQKSDDEMKVIKRTARSLVYYVKQTYNSLTATAWEIGLYYELIIPRHIYLNNWQIVNIGHLIKSAGQLTHVTLSHPYEIINRECSNTLYLHLEECRRLDYVICDVVKIVQPCGNSSDSSDCPVWAEPVKEPHVQISPLKNGSYLVLASSTDCQIPPYVPSVVTVNETTQCFGVTFKKPLVAEEKTSLEPQLPHLQLRLPHLVGIIAKIKGIKIEVTSSGESIKDQLERAKAELLRLDIHEDDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK
Envelope glycoprotein gp130 F 372 Simian Foamy Virus EVNNNYSKLRSMGYALTGAVQTLAQISDINDQNLQQGIYLLRDHIVTLMEATLHDISIMEGMFAVQHVHTHLNHLRTMLMERRIDWTYMSSSWLQTQLQKSDDEMKVIKRTARSLVYYVKQTYNSLTATAWEIGLYYELIIPRHIYLNNWQIVNIGHLIKSAGQLTHVTLSHPYEIINRECSNTLYLHLEECRRLDYVICDVVKIVQPCGNSSDSSDCPVWAEPVKEPHVQISPLKNGSYLVLASSTDCQIPPYVPSVVTVNETTQCFGVTFKKPLVAEEKTSLEPQLPHLQLRLPHLVGIIAKIKGIKIEVTSSGESIKDQLERAKAELLRLDIHEDDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-01-04
Deposition Author(s): Backovic, M. , Fernandez, I.