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FASTA Sequence PDB Format mmCIF Format
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8RH6

Crystal structure of hla-a*11:01 in complex with svlndilsrl, an 10-mer epitope from sars-cov-2 spike (s975-984)

PDB DOI: 10.2210/pdb8rh6/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2023-12-15
Deposition Author(s): Ahn, Y.M. , Gras, S. , Maddumage, J.C. , Szeto, C.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.32 Å

Literature

Crystal structure of hla-a*11:01 in complex with svlndilsrl, an 10-mer epitope from sars-cov-2 spike (s975-984)

Ahn, Y.M. , Gras, S. , Maddumage, J.C. , Szeto, C.

Primary Citation of Related Structures: 8RH6


Proteins
Molecule Chains Sequence Length Organism Sequence
HLA class I histocompatibility antigen A 365 Homo Sapiens , Synthetic Construct MAVMAPRTLLLLLSGALALTQTWAGSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYGCDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWELSSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSSDRKGGSYTQAASSDSAQGSDVSLTACKV
HLA class I histocompatibility antigen C 365 Homo Sapiens , Synthetic Construct MAVMAPRTLLLLLSGALALTQTWAGSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYGCDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWELSSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSSDRKGGSYTQAASSDSAQGSDVSLTACKV
HLA class I histocompatibility antigen E 365 Homo Sapiens , Synthetic Construct MAVMAPRTLLLLLSGALALTQTWAGSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYGCDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWELSSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSSDRKGGSYTQAASSDSAQGSDVSLTACKV
Beta-2-microglobulin B 100 Homo Sapiens , Synthetic Construct MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM
Beta-2-microglobulin D 100 Homo Sapiens , Synthetic Construct MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM
Beta-2-microglobulin F 100 Homo Sapiens , Synthetic Construct MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM
Spike protein S2' I 10 Homo Sapiens , Synthetic Construct SVLNDILSRL
Spike protein S2' H 10 Homo Sapiens , Synthetic Construct SVLNDILSRL
Spike protein S2' G 10 Homo Sapiens , Synthetic Construct SVLNDILSRL
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2023-12-15
Deposition Author(s): Ahn, Y.M. , Gras, S. , Maddumage, J.C. , Szeto, C.