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FASTA Sequence PDB Format mmCIF Format
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8REV

Structure of xpd stalled at a y-fork dna containing a interstrand crosslink

PDB DOI: 10.2210/pdb8rev/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Thermochaetoides Thermophila , Synthetic Construct

Deposited: 2023-12-12
Deposition Author(s): Hove, T. , Kisker, C. , Kuper, J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.1 Å

Literature

Structure of xpd stalled at a y-fork dna containing a interstrand crosslink

Hove, T. , Kisker, C. , Kuper, J.

Primary Citation of Related Structures: 8REV


Proteins
Molecule Chains Sequence Length Organism Sequence
ATP-dependent DNA helicase CHL1 A 797 Thermochaetoides Thermophila , Synthetic Construct MEFMIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGNCVLEMPSGTGKTITLLSLIVAYQQHYAEHRKLIYCSRTMSEIEKALVELKALMKFRAERLGYVEEFRGLGLTSRKNLCLHPSVKREKSGTIVDARCRSLTAGFVKEKKQRGEDVDVCIYHDNLDLLEPHNLIPNGIWTLDNLLKYGEEHKQCPYFTARRMLQYCNVVIYSYHYLLDPKIAERVSRDLSSDSIVVFDEAHNIDNVCIEALSTDITEESLRRATRGAQNLENRINEMKETDQQKLQDEYEKLVEGLRGNDDGTREDSFMTSPVLPQDLLKEAVPGNIRRAEHFVAFLRRFIEYLKTRMKVRQVISETPPSFLAHLKEYTFIEKKPLRWCAERLTSLVRTLELTNIEDYHALQEVATFATLVATYEKGFLLILEPYESDTAEVPNPVLHFCCLDAAIAIKPVFDKFRNVIITSGTISPLEMYPKMLNFTTVVQESYSMTLARRSFLPLIVTRGSDQASISTGFQVRNEPSVVRNYGNLLTEFAKITPDGMVVFFPSYLYMESIISMWQGMGILDEVWKYKLILVETPDAQETSLALETYRTACCNGRGAVLLCVARGKVSEGIDFDHQYGRTVLCIGVPFQYTESRILKARLEFLRETYRIRENDFLSFDAMRHAAQCLGRVLRGKDDYGLMVLADRRFQKKRNQLPKWIAQALLDADTNLSTDMAVSSARRFLKTMAQPFKAKDQEGISTWSLEDLKRHQQKMDEERMKELEAQREKESAPAVERPADQGRESDYEVDEEEEREMMALDVGN
General transcription and DNA repair factor IIH D 534 Thermochaetoides Thermophila , Synthetic Construct MADSDGEYVEDLSDDELHDHRPAEAGPHGARSKAGAGKKRDGKKGKKGSSRHTKAAWEDIQRSWENVVETEDGSITIEALIEAEKRRRLMRDTTPLQRGIIRHLVLVLDMSFAMAEKDLLPNRYLLTLNYAVDFVREYFEQNPISQMGIIAMRDGIAVRVSDMSGNPADHIERLRFWAEHQEPQGNPSLQNALEMCRGALYHTPSHGTREVLIVYGALLSSDPGDIHETISNLVKDRIRVTVVGLAAQVAVCAELCTRTNHGDDSTYAVALHEQHFRELFLAATIPPPATASSATDKNGANGNANAASTDASLLMMGFPSRTLASASHVSLCACHSRPSREGYLCTRCRAKVCRLPAECPACGLTLILSTHLARSYHHLFPLKGWVEVSWAEARKSKQVGCFACLAPFPLPPAPGSEKTGKEPTQKTQGQAQQPPQERQGSSSNSNNAKKTTGISLATALPEARAVGVSESGRYKCPTCGKHFCIDCDVFAHEVIHNCPGCQADMRPKQDASSNNIGPANGLNNVVDGDAMVLD

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (47-MER) e 47 NA AGCTACCATGCCTGCACGAATTAAGCATCGCGTAATCATGGTCATAG
DNA (46-MER) b 46 NA CTATGACCATGATTACGCXCTGCTTGGAATCCTGACGAACTGTAGA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-12-12
Deposition Author(s): Hove, T. , Kisker, C. , Kuper, J.