8RB1
The crystal structure of dna-bound human mutsbeta (msh2_k675r/msh3_k902r) in the canonical mismatch bound conformation with adp bound in msh2 and msh3
PDB DOI: 10.2210/pdb8rb1/pdb
Classification: DNA BINDING PROTEIN Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 2023-12-01 Deposition Author(s): Blaesse, M. , Boudet, J. , Costanzi, E. , Dominguez, C. , Felsenfeld, D.P. , Finley, M. , Haque, T.S. , Iyer, R.R. , Monteagudo, E. , Neudegger, T. , Plotnikov, N.V. , Prasad, B.C. , Steinbacher, S. , Thieulin-Pardo, G. , Thomsen, M. , Vogt, T.F. , Wilkinson, H.A.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.085 Å
The crystal structure of dna-bound human mutsbeta (msh2_k675r/msh3_k902r) in the canonical mismatch bound conformation with adp bound in msh2 and msh3
Blaesse, M. , Boudet, J. , Costanzi, E. , Dominguez, C. , Felsenfeld, D.P. , Finley, M. , Haque, T.S. , Iyer, R.R. , Monteagudo, E. , Neudegger, T. , Plotnikov, N.V. , Prasad, B.C. , Steinbacher, S. , Thieulin-Pardo, G. , Thomsen, M. , Vogt, T.F. , Wilkinson, H.A.
Primary Citation of Related Structures: 8RB1
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA mismatch repair protein Msh2 | A | 934 | Homo Sapiens , Synthetic Construct | MAVQPKETLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGRSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQMPFTEMSEENITIKLKQLKAEVIAKNNSFVNEIISRIKVTT |
| DNA mismatch repair protein Msh3 | B | 918 | Homo Sapiens , Synthetic Construct | GPKSANKRSKSIYTPLELQYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNRSSLFSRKLTALYTKSTLIGEDVNPLIKLDDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGNIFIGIVGVQPATGEVVFDSFQDSASRSELETRMSSLQPVELLLPSALSEQTEALIHRATSVSVQDDRIRVERMDNIYFEYSHAFQAVTEFYAKDTVDIKGSQIISGIVNLEKPVICSLAAIIKYLKEFNLEKMLSKPENFKQLSSKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVLDHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERGLCSIYHKKCSTQEFFLIVKTLYHLKSEFQAIIPAVNSHIQSDLLRTVILEIPELLSPVEHYLKILNEQAAKVGDKTELFKDLSDFPLIKKRKDEIQGVIDEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSPFIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIFSLAKVAKQGDYCRPTVQEERKIVIKNGRHPVIDVLLGEQDQYVPNNTDLSEDSERVMIITGPNMGGRSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFMEELTDTAEIIRKATSQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKNYSHQVGNYHMGFLVSEDESKLDPGAAEQVPDFVTFLYQITRGIAARSYGLNVAKLADVPGEILKKAAHKSKELEGLINTKRKRLKYFAKLWTMHNAQDLQKWTEEFNMEETQTS |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(*TP*CP*TP*AP*TP*CP*TP*GP*AP*AP*GP*CP*CP*GP*AP*TP*CP*GP*AP*TP*GP*G)-3') | c | 24 | NA | CCTCTATCTGAAGCCGATCGATGG |
| DNA (5'-D(*TP*CP*AP*TP*CP*GP*AP*TP*CP*GP*CP*AP*GP*CP*TP*TP*CP*AP*GP*AP*TP*AP*GP*G)-3') | d | 24 | NA | TCATCGATCGCAGCTTCAGATAGG |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2023-12-01 Deposition Author(s): Blaesse, M. , Boudet, J. , Costanzi, E. , Dominguez, C. , Felsenfeld, D.P. , Finley, M. , Haque, T.S. , Iyer, R.R. , Monteagudo, E. , Neudegger, T. , Plotnikov, N.V. , Prasad, B.C. , Steinbacher, S. , Thieulin-Pardo, G. , Thomsen, M. , Vogt, T.F. , Wilkinson, H.A.